Detailed information of deep learning profile BP001055.1

This page shows detailed deep learning-derived predictions and motifs for FOXA2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA2
Model ID: BP001055.1
Cell line/tissue: HepG2
Class: Fork head/winged helix factors
Family: FOX
Best Match(es): MA0047.3 MA0032.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9Y261  
Source: ENCSR490AMH
Model: BPNet

Contribution weight matrix (CWM)

A [ -8.88e-05 4.45e-03 7.68e-06 1.80e-06 -4.51e-06 4.91e-04 -1.92e-04 2.12e-03 -6.42e-04 9.43e-03 ]
C [ 1.13e-05 2.72e-05 5.02e-06 2.49e-06 1.54e-06 1.43e-06 1.84e-02 4.52e-04 7.66e-03 -1.78e-04 ]
G [ -3.13e-07 4.71e-02 -4.16e-07 2.20e-05 4.01e-05 3.49e-02 -1.72e-04 -1.25e-05 -6.42e-05 1.88e-05 ]
T [ 4.13e-02 -2.37e-06 6.08e-02 5.51e-02 5.92e-02 -5.16e-05 4.41e-03 7.80e-03 8.94e-03 4.97e-03 ]

Frequency matrix

A [ 1662 9278 114 24 87 3102 7246 12334 6804 18609 ]
C [ 941 1348 46 13 10 1050 19518 10864 13800 4421 ]
G [ 728 37543 11 1119 356 41275 4310 4658 7056 5822 ]
T [ 45809 972 48969 47984 48687 3714 18066 21284 21480 20288 ]

5 profiles found for the same TF (FOXA2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000298.1 FOXA2 ENCSR066EBK HepG2 Homo sapiens
BP000704.1 FOXA2 ENCSR310NYI liver Homo sapiens
BP000787.1 FOXA2 ENCSR080XEY liver Homo sapiens
BP000906.1 FOXA2 ENCSR000BNI HepG2 Homo sapiens
BP001115.1 FOXA2 ENCSR000BRE A549 Homo sapiens
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