This page shows detailed deep learning-derived predictions and motifs for CTCF in myotube using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001056.1 |
| Cell line/tissue: | myotube |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000ANS |
| Model: | BPNet |
| A [ | -1.68e-03 | -8.82e-04 | 2.72e-02 | -1.80e-03 | -4.69e-03 | 7.15e-02 | -4.10e-04 | 1.27e-02 | -4.60e-03 | -1.13e-03 | -1.86e-03 | -2.32e-03 | 7.22e-03 | -2.89e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.49e-02 | 1.80e-01 | -3.13e-05 | 5.78e-02 | 1.72e-02 | -3.41e-04 | -8.06e-05 | -1.79e-04 | -3.46e-04 | -1.11e-04 | 1.59e-03 | 7.39e-02 | 3.62e-04 | 2.69e-02 | ] |
| G [ | -1.80e-03 | -3.55e-04 | 5.81e-03 | 1.29e-02 | -2.28e-03 | 1.19e-03 | 1.76e-01 | 7.37e-02 | 5.57e-02 | 1.59e-01 | 9.89e-02 | -7.29e-06 | 4.95e-02 | 1.01e-02 | ] |
| T [ | -3.04e-03 | -5.35e-04 | -5.87e-03 | -2.09e-03 | 1.84e-02 | -2.27e-03 | -4.13e-04 | -7.15e-04 | 3.57e-03 | -8.34e-04 | -9.00e-04 | -2.99e-03 | -3.21e-03 | -4.77e-04 | ] |
| A [ | 4575 | 46 | 32289 | 2756 | 7789 | 37332 | 550 | 17437 | 3650 | 914 | 1113 | 7629 | 19022 | 5226 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 36101 | 46513 | 2137 | 26150 | 17658 | 1334 | 108 | 420 | 1728 | 295 | 1632 | 32903 | 2891 | 21997 | ] |
| G [ | 2880 | 5 | 5082 | 16065 | 3863 | 4644 | 45526 | 28190 | 25172 | 44520 | 40385 | 1657 | 21637 | 14176 | ] |
| T [ | 3012 | 5 | 7060 | 1599 | 17260 | 3260 | 385 | 523 | 16019 | 840 | 3439 | 4380 | 3019 | 5170 | ] |
