Detailed information of deep learning profile BP001058.1

This page shows detailed deep learning-derived predictions and motifs for GABPA in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GABPA
Model ID: BP001058.1
Cell line/tissue: HeLa-S3
Class: Tryptophan cluster factors
Family: Ets-related
Best Match(es): MA0062.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q06546  
Source: ENCSR000BHS
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.75e-02 -1.34e-04 -1.05e-04 1.23e-05 -1.03e-05 2.19e-05 -4.02e-05 -2.79e-04 ]
C [ -1.19e-04 2.24e-02 4.83e-05 2.61e-05 7.95e-02 9.72e-02 7.56e-05 2.04e-04 ]
G [ 2.87e-03 9.98e-04 1.27e-04 8.41e-05 4.57e-05 7.95e-06 5.78e-02 2.78e-02 ]
T [ -1.45e-03 4.33e-04 5.16e-02 7.17e-02 2.12e-05 0.00e+00 -6.91e-04 -2.02e-04 ]

Frequency matrix

A [ 13534 2960 3187 1183 336 7 290 2903 ]
C [ 7865 19258 2637 2384 37473 38562 3358 10002 ]
G [ 12450 7876 3090 1293 371 42 26334 20682 ]
T [ 4762 8517 29697 33751 431 0 8629 5024 ]

13 profiles found for the same TF (GABPA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000840.1 GABPA ENCSR038GMB liver Homo sapiens
BP000852.1 GABPA ENCSR290MUH K562 Homo sapiens
BP001108.1 GABPA ENCSR000BPY A549 Homo sapiens
Showing 3 profiles of page 2 from 2 pages