Detailed information of deep learning profile BP001058.1

This page shows detailed deep learning-derived predictions and motifs for GABPA in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GABPA
Model ID: BP001058.1
Cell line/tissue: HeLa-S3
Class: Tryptophan cluster factors
Family: Ets-related
Best Match(es): MA0062.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q06546  
Source: ENCSR000BHS
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.75e-02 -1.34e-04 -1.05e-04 1.23e-05 -1.03e-05 2.19e-05 -4.02e-05 -2.79e-04 ]
C [ -1.19e-04 2.24e-02 4.83e-05 2.61e-05 7.95e-02 9.72e-02 7.56e-05 2.04e-04 ]
G [ 2.87e-03 9.98e-04 1.27e-04 8.41e-05 4.57e-05 7.95e-06 5.78e-02 2.78e-02 ]
T [ -1.45e-03 4.33e-04 5.16e-02 7.17e-02 2.12e-05 0.00e+00 -6.91e-04 -2.02e-04 ]

Frequency matrix

A [ 13534 2960 3187 1183 336 7 290 2903 ]
C [ 7865 19258 2637 2384 37473 38562 3358 10002 ]
G [ 12450 7876 3090 1293 371 42 26334 20682 ]
T [ 4762 8517 29697 33751 431 0 8629 5024 ]

13 profiles found for the same TF (GABPA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000192.1 GABPA ENCSR000BIW H1 Homo sapiens
BP000204.1 GABPA ENCSR350ORK liver Homo sapiens
BP000323.1 GABPA ENCSR269TNX HepG2 Homo sapiens
BP000347.1 GABPA ENCSR331HPA GM12878 Homo sapiens
BP000391.1 GABPA ENCSR038RXU MCF-7 Homo sapiens
BP000406.1 GABPA ENCSR000BTG SK-N-SH Homo sapiens
BP000563.1 GABPA ENCSR000BLO K562 Homo sapiens
BP000582.1 GABPA ENCSR000BUK MCF-7 Homo sapiens
BP000699.1 GABPA ENCSR000BTK HL-60 Homo sapiens
BP000823.1 GABPA ENCSR000BJK HepG2 Homo sapiens
Showing 10 profiles of page 1 from 2 pages