Detailed information of deep learning profile BP001058.1

This page shows detailed deep learning-derived predictions and motifs for GABPA in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GABPA
Model ID: BP001058.1
Cell line/tissue: HeLa-S3
Class: Tryptophan cluster factors
Family: Ets-related
Best Match(es): MA0062.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q06546  
Source: ENCSR000BHS
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.02e-04 -6.91e-04 0.00e+00 2.12e-05 7.17e-02 5.16e-02 4.33e-04 -1.45e-03 ]
C [ 2.78e-02 5.78e-02 7.95e-06 4.57e-05 8.41e-05 1.27e-04 9.98e-04 2.87e-03 ]
G [ 2.04e-04 7.56e-05 9.72e-02 7.95e-02 2.61e-05 4.83e-05 2.24e-02 -1.19e-04 ]
T [ -2.79e-04 -4.02e-05 2.19e-05 -1.03e-05 1.23e-05 -1.05e-04 -1.34e-04 1.75e-02 ]

Frequency matrix

A [ 5024 8629 0 431 33751 29697 8517 4762 ]
C [ 20682 26334 42 371 1293 3090 7876 12450 ]
G [ 10002 3358 38562 37473 2384 2637 19258 7865 ]
T [ 2903 290 7 336 1183 3187 2960 13534 ]

13 profiles found for the same TF (GABPA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000192.1 GABPA ENCSR000BIW H1 Homo sapiens
BP000204.1 GABPA ENCSR350ORK liver Homo sapiens
BP000323.1 GABPA ENCSR269TNX HepG2 Homo sapiens
BP000347.1 GABPA ENCSR331HPA GM12878 Homo sapiens
BP000391.1 GABPA ENCSR038RXU MCF-7 Homo sapiens
BP000406.1 GABPA ENCSR000BTG SK-N-SH Homo sapiens
BP000563.1 GABPA ENCSR000BLO K562 Homo sapiens
BP000582.1 GABPA ENCSR000BUK MCF-7 Homo sapiens
BP000699.1 GABPA ENCSR000BTK HL-60 Homo sapiens
BP000823.1 GABPA ENCSR000BJK HepG2 Homo sapiens
Showing 10 profiles of page 1 from 2 pages