This page shows detailed deep learning-derived predictions and motifs for CTCF in osteoblast using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001060.1 |
| Cell line/tissue: | osteoblast |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000APF |
| Model: | BPNet |
| A [ | -2.28e-03 | -1.15e-03 | 3.58e-02 | -2.51e-03 | -5.43e-03 | 9.68e-02 | -5.58e-04 | 1.64e-02 | -6.80e-03 | -1.73e-03 | -2.91e-03 | -3.53e-03 | 9.00e-03 | -3.51e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.26e-01 | 2.28e-01 | 2.61e-04 | 7.56e-02 | 1.86e-02 | -3.59e-04 | -1.10e-04 | -3.05e-04 | -2.76e-04 | -8.60e-05 | 1.66e-03 | 9.56e-02 | 9.20e-04 | 3.74e-02 | ] |
| G [ | -2.60e-03 | -5.25e-04 | 7.40e-03 | 1.81e-02 | -2.36e-03 | 2.12e-03 | 2.28e-01 | 1.01e-01 | 7.41e-02 | 2.02e-01 | 1.30e-01 | 6.31e-05 | 6.52e-02 | 1.14e-02 | ] |
| T [ | -3.40e-03 | -8.05e-04 | -6.86e-03 | -2.72e-03 | 2.44e-02 | -3.43e-03 | -5.87e-04 | -1.10e-03 | 3.36e-03 | -1.48e-03 | -1.09e-03 | -4.06e-03 | -4.91e-03 | -8.15e-04 | ] |
| A [ | 3925 | 0 | 31479 | 2423 | 6879 | 37867 | 1 | 18318 | 2949 | 558 | 1657 | 8014 | 18331 | 5303 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 35558 | 44169 | 1432 | 24712 | 17619 | 792 | 0 | 280 | 1039 | 103 | 2512 | 29661 | 3227 | 20263 | ] |
| G [ | 2214 | 0 | 4342 | 15655 | 2903 | 3084 | 44166 | 25056 | 25788 | 43104 | 36123 | 2083 | 19517 | 13264 | ] |
| T [ | 2472 | 0 | 6916 | 1378 | 16767 | 2426 | 2 | 515 | 14393 | 404 | 3877 | 4411 | 3095 | 5338 | ] |
