This page shows detailed deep learning-derived predictions and motifs for CTCF in Caco-2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001061.1 |
| Cell line/tissue: | Caco-2 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR961IOA |
| Model: | BPNet |
| A [ | -9.54e-04 | -3.31e-03 | -2.84e-03 | -2.53e-04 | -7.65e-04 | 5.24e-03 | -5.11e-04 | -1.94e-04 | -2.05e-03 | 2.21e-02 | -1.67e-03 | -4.81e-03 | -4.60e-04 | -2.36e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.02e-02 | 4.49e-02 | -2.31e-04 | 9.78e-02 | 1.54e-01 | 5.19e-02 | 7.34e-02 | 1.71e-01 | 9.12e-04 | -2.31e-03 | 1.10e-02 | 4.62e-03 | -3.10e-04 | -1.68e-03 | ] |
| G [ | 2.43e-02 | 2.71e-04 | 7.32e-02 | 1.10e-03 | -9.03e-05 | -3.48e-04 | -1.27e-04 | -4.67e-05 | -2.32e-04 | 1.69e-02 | 5.73e-02 | -1.31e-04 | 1.68e-01 | 9.06e-02 | ] |
| T [ | -2.38e-03 | 7.30e-03 | -1.88e-03 | -1.85e-03 | -9.58e-04 | -3.56e-03 | 1.48e-02 | -3.30e-04 | 7.67e-02 | -5.07e-03 | -1.23e-03 | 2.49e-02 | -7.46e-04 | -1.56e-03 | ] |
| A [ | 3792 | 2235 | 3018 | 2889 | 185 | 10280 | 263 | 1 | 1411 | 12095 | 837 | 4620 | 0 | 1668 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9844 | 12814 | 1557 | 25867 | 30910 | 19044 | 17850 | 31375 | 1437 | 1634 | 11500 | 2827 | 0 | 1187 | ] |
| G [ | 13973 | 2627 | 21233 | 1576 | 63 | 630 | 95 | 1 | 458 | 13244 | 17653 | 746 | 31377 | 25832 | ] |
| T [ | 3767 | 13702 | 5569 | 1046 | 219 | 1423 | 13169 | 0 | 28071 | 4404 | 1387 | 23184 | 0 | 2689 | ] |
