Detailed information of deep learning profile BP001062.1

This page shows detailed deep learning-derived predictions and motifs for MYC in MCF 10A using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP001062.1
Cell line/tissue: MCF 10A
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0147.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P01108  
Source: ENCSR000DOS
Model: BPNet

Contribution weight matrix (CWM)

A [ 7.25e-04 -3.59e-05 4.04e-02 0.00e+00 1.44e-05 -2.53e-04 0.00e+00 -1.40e-03 ]
C [ 2.00e-02 8.09e-02 -1.40e-06 9.83e-02 0.00e+00 8.47e-04 1.38e-04 1.13e-02 ]
G [ 1.78e-03 1.32e-04 3.63e-03 1.53e-05 9.91e-02 -3.42e-06 8.97e-02 6.21e-03 ]
T [ -7.15e-04 -4.84e-06 -8.51e-04 8.65e-06 0.00e+00 5.57e-02 -2.20e-05 1.32e-03 ]

Frequency matrix

A [ 12922 10414 30887 0 16 5079 137 8246 ]
C [ 26751 47640 3876 70020 0 15894 858 26110 ]
G [ 20029 8537 26731 0 70025 3755 67373 23579 ]
T [ 10339 3450 8547 21 0 45313 1673 12106 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000752.1 MYC ENCSR000DOM MCF 10A Homo sapiens
BP000821.1 MYC ENCSR000EZU K562 Homo sapiens
BP000861.1 MYC ENCSR000EGJ K562 Homo sapiens
BP000959.1 MYC ENCSR000DMM MCF-7 Homo sapiens
BP000963.1 MYC ENCSR000FAZ K562 Homo sapiens
BP001117.1 MYC ENCSR000FAG K562 Homo sapiens
BP001176.1 MYC ENCSR000EZD HeLa-S3 Homo sapiens
BP001187.1 MYC ENCSR000EBY H1 Homo sapiens
Showing 8 profiles of page 2 from 2 pages