Detailed information of deep learning profile BP001062.1

This page shows detailed deep learning-derived predictions and motifs for MYC in MCF 10A using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP001062.1
Cell line/tissue: MCF 10A
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0147.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P01108  
Source: ENCSR000DOS
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.32e-03 -2.20e-05 5.57e-02 0.00e+00 8.65e-06 -8.51e-04 -4.84e-06 -7.15e-04 ]
C [ 6.21e-03 8.97e-02 -3.42e-06 9.91e-02 1.53e-05 3.63e-03 1.32e-04 1.78e-03 ]
G [ 1.13e-02 1.38e-04 8.47e-04 0.00e+00 9.83e-02 -1.40e-06 8.09e-02 2.00e-02 ]
T [ -1.40e-03 0.00e+00 -2.53e-04 1.44e-05 0.00e+00 4.04e-02 -3.59e-05 7.25e-04 ]

Frequency matrix

A [ 12106 1673 45313 0 21 8547 3450 10339 ]
C [ 23579 67373 3755 70025 0 26731 8537 20029 ]
G [ 26110 858 15894 0 70020 3876 47640 26751 ]
T [ 8246 137 5079 16 0 30887 10414 12922 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000197.1 MYC ENCSR000DYC A549 Homo sapiens
BP000315.1 MYC ENCSR000EZV K562 Homo sapiens
BP000398.1 MYC ENCSR000DMP MCF-7 Homo sapiens
BP000430.1 MYC ENCSR784BVD HepG2 Homo sapiens
BP000504.1 MYC ENCSR744JJU K562 Homo sapiens
BP000506.1 MYC ENCSR000EHR NB4 Homo sapiens
BP000515.1 MYC ENCSR000DMQ MCF-7 Homo sapiens
BP000517.1 MYC ENCSR000DMJ MCF-7 Homo sapiens
BP000662.1 MYC ENCSR000DLZ K562 Homo sapiens
BP000726.1 MYC ENCSR000EGS K562 Homo sapiens
Showing 10 profiles of page 1 from 2 pages