This page shows detailed deep learning-derived predictions and motifs for CTCF in RWPE1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001065.1 |
| Cell line/tissue: | RWPE1 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR303GFI |
| Model: | BPNet |
| A [ | -1.46e-03 | -2.83e-03 | -2.63e-03 | -2.63e-04 | -4.30e-04 | 9.67e-03 | -4.34e-04 | -2.20e-04 | -1.84e-03 | 2.05e-02 | -1.81e-03 | -4.50e-03 | -4.34e-04 | -2.55e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.12e-02 | 5.66e-02 | -6.79e-04 | 1.04e-01 | 1.63e-01 | 4.58e-02 | 6.23e-02 | 1.69e-01 | 2.21e-04 | -2.31e-03 | 1.12e-02 | 5.65e-03 | -3.20e-04 | -1.88e-03 | ] |
| G [ | 3.22e-02 | -7.00e-04 | 9.19e-02 | -3.24e-04 | -1.01e-04 | -1.56e-04 | -1.34e-04 | -8.06e-05 | -2.61e-04 | 1.42e-02 | 5.85e-02 | -2.54e-04 | 1.71e-01 | 8.47e-02 | ] |
| T [ | -2.70e-03 | 8.12e-03 | -2.64e-03 | -1.09e-03 | -7.66e-04 | -3.04e-03 | 2.00e-02 | -3.58e-04 | 7.33e-02 | -4.92e-03 | -1.52e-03 | 2.81e-02 | -6.36e-04 | -1.74e-03 | ] |
| A [ | 3191 | 1682 | 2866 | 2620 | 343 | 13534 | 314 | 193 | 2116 | 12723 | 1132 | 4660 | 64 | 2458 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 10638 | 18323 | 800 | 31401 | 34646 | 18382 | 20734 | 34975 | 2976 | 3211 | 12426 | 5281 | 78 | 2521 | ] |
| G [ | 18237 | 1410 | 27204 | 828 | 133 | 1717 | 378 | 93 | 1356 | 14078 | 19972 | 1620 | 35224 | 27254 | ] |
| T [ | 3504 | 14155 | 4699 | 721 | 448 | 1937 | 14144 | 309 | 29122 | 5558 | 2041 | 24009 | 204 | 3337 | ] |
