This page shows detailed deep learning-derived predictions and motifs for CTCF in HEK293 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001066.1 |
| Cell line/tissue: | HEK293 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR617IFZ |
| Model: | BPNet |
| A [ | -5.33e-04 | -1.26e-03 | -1.25e-03 | -3.79e-04 | -2.08e-04 | 3.29e-03 | -1.64e-04 | -8.64e-05 | -8.24e-04 | 6.62e-03 | -7.21e-04 | -1.59e-03 | -1.54e-04 | -9.48e-04 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 5.04e-03 | 2.05e-02 | -3.02e-04 | 4.35e-02 | 6.28e-02 | 1.97e-02 | 2.42e-02 | 6.62e-02 | 1.71e-04 | -7.66e-04 | 4.56e-03 | 1.85e-03 | -6.33e-05 | -5.51e-04 | ] |
| G [ | 1.13e-02 | -2.92e-04 | 3.63e-02 | 9.77e-05 | -1.23e-05 | -6.38e-05 | -1.51e-05 | -6.83e-06 | -3.84e-05 | 6.29e-03 | 2.35e-02 | -2.34e-04 | 6.38e-02 | 3.18e-02 | ] |
| T [ | -1.17e-03 | 3.73e-03 | -1.52e-03 | -5.92e-04 | -2.65e-04 | -1.06e-03 | 6.26e-03 | -1.64e-04 | 2.81e-02 | -1.69e-03 | -5.34e-04 | 1.10e-02 | -3.08e-04 | -7.66e-04 | ] |
| A [ | 5577 | 3165 | 4024 | 3742 | 533 | 13470 | 906 | 180 | 3435 | 14589 | 1285 | 7456 | 211 | 2524 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 14451 | 20448 | 2669 | 34914 | 42642 | 24956 | 27291 | 43576 | 4879 | 4517 | 15475 | 7989 | 184 | 3046 | ] |
| G [ | 18912 | 4256 | 29951 | 3580 | 310 | 2505 | 829 | 65 | 1901 | 18210 | 24851 | 2488 | 42883 | 34732 | ] |
| T [ | 5197 | 16268 | 7493 | 1901 | 652 | 3206 | 15111 | 316 | 33923 | 6821 | 2526 | 26204 | 859 | 3835 | ] |
