This page shows detailed deep learning-derived predictions and motifs for CTCF in sigmoid colon using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001067.1 |
| Cell line/tissue: | sigmoid colon |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR721AHD |
| Model: | BPNet |
| A [ | -1.36e-03 | -4.43e-04 | 2.13e-02 | -1.11e-03 | -4.02e-03 | 5.97e-02 | -2.74e-04 | 1.29e-02 | -2.11e-03 | -5.96e-04 | -8.29e-04 | -1.38e-03 | 5.51e-03 | -1.90e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.50e-02 | 1.36e-01 | -4.50e-04 | 5.10e-02 | 1.39e-02 | -1.42e-04 | -3.34e-05 | -2.40e-05 | 2.61e-05 | -5.57e-05 | 1.71e-04 | 6.11e-02 | -3.49e-04 | 1.93e-02 | ] |
| G [ | -1.16e-03 | -1.24e-04 | 6.62e-03 | 9.13e-03 | -1.74e-03 | 4.86e-04 | 1.31e-01 | 4.92e-02 | 3.75e-02 | 1.21e-01 | 7.79e-02 | -1.90e-04 | 3.72e-02 | 9.52e-03 | ] |
| T [ | -1.99e-03 | -3.42e-04 | -3.51e-03 | -1.18e-03 | 1.36e-02 | -1.52e-03 | -1.90e-04 | -3.37e-04 | 1.84e-03 | -4.21e-04 | -7.64e-04 | -2.19e-03 | -1.78e-03 | -9.99e-04 | ] |
| A [ | 2548 | 461 | 19925 | 1568 | 4494 | 25180 | 182 | 10886 | 2180 | 492 | 1273 | 4674 | 11270 | 3421 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 24261 | 29340 | 1171 | 17834 | 12868 | 1032 | 59 | 347 | 1718 | 339 | 1628 | 21090 | 2262 | 14095 | ] |
| G [ | 1691 | 127 | 5264 | 9842 | 2399 | 2258 | 29709 | 18500 | 16278 | 28793 | 24726 | 1570 | 14631 | 9465 | ] |
| T [ | 1554 | 126 | 3694 | 811 | 10293 | 1585 | 104 | 321 | 9878 | 430 | 2427 | 2719 | 1891 | 3073 | ] |