This page shows detailed deep learning-derived predictions and motifs for CTCF in AG09309 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001070.1 |
| Cell line/tissue: | AG09309 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DPP |
| Model: | BPNet |
| A [ | -1.16e-03 | -3.91e-03 | -3.92e-03 | -1.16e-03 | -9.08e-04 | 3.30e-03 | -7.50e-04 | -3.33e-04 | -2.42e-03 | 1.93e-02 | -2.26e-03 | -6.26e-03 | -5.69e-04 | -3.31e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.74e-03 | 5.10e-02 | 4.25e-04 | 1.02e-01 | 1.64e-01 | 5.59e-02 | 7.48e-02 | 1.83e-01 | 9.21e-04 | -1.99e-03 | 1.34e-02 | 6.74e-03 | -3.41e-04 | -1.46e-03 | ] |
| G [ | 3.22e-02 | 7.05e-04 | 7.92e-02 | 1.18e-03 | 3.37e-05 | -2.58e-04 | -9.90e-05 | -5.57e-05 | -2.20e-04 | 1.63e-02 | 5.90e-02 | 9.62e-05 | 1.84e-01 | 9.66e-02 | ] |
| T [ | -3.83e-03 | 5.76e-03 | -3.85e-03 | -2.25e-03 | -1.18e-03 | -5.30e-03 | 1.33e-02 | -4.28e-04 | 7.62e-02 | -5.62e-03 | -1.88e-03 | 2.24e-02 | -9.95e-04 | -2.31e-03 | ] |
| A [ | 5867 | 3443 | 4771 | 4227 | 347 | 16884 | 610 | 295 | 3456 | 17784 | 1789 | 8042 | 0 | 3321 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 15282 | 23743 | 2316 | 41791 | 49651 | 27301 | 30688 | 49673 | 4595 | 4366 | 18224 | 6286 | 1 | 3355 | ] |
| G [ | 23676 | 3687 | 34566 | 2678 | 88 | 2060 | 469 | 104 | 1475 | 20055 | 27293 | 2403 | 50546 | 38987 | ] |
| T [ | 5731 | 19683 | 8901 | 1859 | 469 | 4310 | 18788 | 483 | 41029 | 8349 | 3248 | 33824 | 8 | 4892 | ] |
