Detailed information of deep learning profile BP001071.1

This page shows detailed deep learning-derived predictions and motifs for ESR1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ESR1
Model ID: BP001071.1
Cell line/tissue: MCF-7
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0112.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P03372  
Source: ENCSR463GOT
Model: BPNet

Contribution weight matrix (CWM)

A [ -8.79e-05 1.39e-02 3.76e-04 8.15e-05 2.56e-06 2.30e-05 4.59e-02 1.09e-03 2.59e-04 1.37e-03 -3.78e-04 2.56e-03 1.50e-03 3.01e-04 6.08e-05 ]
C [ 4.13e-03 -1.85e-05 5.51e-04 6.01e-06 4.40e-06 4.55e-02 3.98e-05 1.42e-03 5.68e-03 8.05e-04 3.53e-03 -2.77e-04 5.97e-04 4.15e-03 7.66e-03 ]
G [ -2.46e-04 6.75e-03 1.86e-02 5.12e-02 6.44e-05 -6.16e-07 1.34e-04 4.90e-04 2.42e-03 4.53e-04 5.81e-05 6.41e-03 6.16e-04 2.71e-04 4.69e-04 ]
T [ 5.53e-03 -1.74e-04 4.99e-04 -1.95e-06 4.15e-02 6.41e-05 3.15e-06 3.02e-03 -3.23e-04 2.21e-03 2.94e-03 1.24e-04 7.65e-04 7.16e-04 6.46e-04 ]

Frequency matrix

A [ 19651 41662 16889 675 1201 1062 80207 15449 19960 20405 18525 21470 24606 17412 18053 ]
C [ 20867 6263 4924 18 932 77972 40 22335 22814 18415 20405 17088 18555 28691 28888 ]
G [ 15851 27808 42304 81552 7925 620 1808 24184 22392 22958 16877 27843 19751 17060 16073 ]
T [ 25973 6610 18226 98 72285 2689 288 20375 17176 20566 26536 15942 19430 19181 19329 ]

Alternative motif patterns (AMPs)

5 profiles found for the same TF (ESR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000282.1 ESR1 ENCSR000BQD T47D Homo sapiens
BP000481.1 ESR1 ENCSR000BKN T47D Homo sapiens
BP000854.1 ESR1 ENCSR000BIY Ishikawa Homo sapiens
BP000896.1 ESR1 ENCSR000BQR Ishikawa Homo sapiens
BP001259.1 ESR1 ENCSR000BJS T47D Homo sapiens
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