This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001072.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR841XDW |
| Model: | BPNet |
| A [ | -1.73e-03 | -3.61e-03 | -3.37e-03 | -5.83e-04 | -3.28e-04 | 5.30e-03 | -5.29e-04 | -2.71e-04 | -2.64e-03 | 1.85e-02 | -2.18e-03 | -6.32e-03 | -6.39e-04 | -3.29e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.24e-02 | 5.61e-02 | -9.18e-04 | 1.16e-01 | 1.73e-01 | 5.44e-02 | 7.14e-02 | 1.85e-01 | 9.17e-04 | -2.33e-03 | 1.51e-02 | 6.90e-03 | -3.04e-04 | -1.92e-03 | ] |
| G [ | 3.19e-02 | -1.02e-03 | 9.29e-02 | -2.19e-04 | 9.97e-07 | 2.10e-04 | -5.89e-06 | -4.63e-05 | -1.23e-04 | 1.76e-02 | 6.11e-02 | -3.94e-04 | 1.80e-01 | 9.33e-02 | ] |
| T [ | -2.88e-03 | 9.76e-03 | -3.22e-03 | -1.08e-03 | -5.15e-04 | -4.04e-03 | 1.86e-02 | -4.42e-04 | 7.58e-02 | -6.23e-03 | -2.61e-03 | 2.27e-02 | -8.91e-04 | -1.84e-03 | ] |
| A [ | 3979 | 2085 | 3339 | 3017 | 244 | 14071 | 419 | 162 | 2599 | 14201 | 1316 | 5634 | 77 | 2671 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 12882 | 20236 | 1343 | 35100 | 39849 | 22136 | 24161 | 40023 | 3263 | 3689 | 14651 | 6164 | 96 | 2879 | ] |
| G [ | 19541 | 2090 | 29903 | 1516 | 109 | 1968 | 524 | 70 | 1434 | 16262 | 22065 | 2020 | 40101 | 31121 | ] |
| T [ | 4192 | 16183 | 6009 | 961 | 392 | 2419 | 15490 | 339 | 33298 | 6442 | 2562 | 26776 | 320 | 3922 | ] |
