This page shows detailed deep learning-derived predictions and motifs for CTCF in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001074.1 |
| Cell line/tissue: | HCT116 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR908TBJ |
| Model: | BPNet |
| A [ | -8.27e-04 | 2.25e-03 | -2.22e-03 | -2.22e-03 | 2.16e-05 | 9.55e-04 | 6.74e-04 | 2.33e-04 | -1.44e-03 | -4.80e-03 | -4.81e-03 | 7.72e-03 | -1.11e-03 | -9.92e-04 | 3.32e-02 | -1.45e-03 | -3.54e-03 | 9.07e-02 | -3.52e-04 | 7.85e-03 | -5.24e-03 | -1.76e-03 | -2.27e-03 | -1.18e-03 | 4.30e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | -3.27e-03 | 1.92e-03 | 3.29e-02 | 1.55e-02 | 7.40e-03 | 3.46e-03 | 6.54e-04 | 2.31e-04 | 4.49e-03 | 1.62e-02 | 6.66e-03 | -2.79e-03 | 1.20e-01 | 1.95e-01 | -2.97e-04 | 6.71e-02 | 1.61e-02 | -3.59e-04 | -2.10e-05 | -1.55e-04 | -5.73e-05 | -2.69e-04 | 2.74e-03 | 5.69e-02 | 1.98e-03 | ] |
| G [ | -1.48e-03 | -1.91e-03 | -3.61e-03 | -1.86e-03 | -6.12e-04 | -7.21e-04 | -7.38e-05 | -8.72e-04 | 7.46e-04 | -2.26e-03 | 1.06e-02 | 1.68e-02 | -1.78e-03 | -4.05e-04 | 4.12e-03 | 1.44e-02 | -1.94e-03 | 1.97e-03 | 1.94e-01 | 1.00e-01 | 6.22e-02 | 1.44e-01 | 8.04e-02 | 5.19e-04 | 3.52e-02 | ] |
| T [ | 2.98e-02 | 3.44e-03 | -4.72e-04 | 5.55e-04 | -1.87e-03 | -6.67e-04 | 1.37e-03 | 4.20e-03 | 1.19e-03 | 1.04e-02 | -2.09e-03 | -4.45e-03 | -2.14e-03 | -6.38e-04 | -5.71e-03 | -2.21e-03 | 2.81e-02 | -2.16e-03 | -2.95e-04 | -8.46e-04 | 2.36e-03 | -1.27e-03 | -9.44e-04 | -2.87e-03 | -2.94e-03 | ] |
| A [ | 10173 | 13354 | 9942 | 11983 | 14401 | 14933 | 14638 | 14891 | 12515 | 7739 | 11832 | 16897 | 4308 | 825 | 39409 | 3296 | 8122 | 48906 | 184 | 17542 | 4732 | 1645 | 4302 | 11192 | 20920 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8798 | 13870 | 25564 | 20950 | 18085 | 16189 | 14791 | 12916 | 15557 | 19219 | 12620 | 6024 | 48080 | 56028 | 2282 | 33664 | 22971 | 1011 | 34 | 279 | 2259 | 1604 | 4930 | 34385 | 6919 | ] |
| G [ | 11854 | 12349 | 7961 | 8996 | 11812 | 12853 | 11973 | 11151 | 13792 | 7237 | 19547 | 23665 | 2198 | 108 | 6032 | 18647 | 3273 | 4222 | 56803 | 38406 | 33136 | 51511 | 42007 | 4626 | 23711 | ] |
| T [ | 26331 | 17582 | 13689 | 15228 | 12859 | 13181 | 15754 | 18198 | 15292 | 22960 | 13157 | 10570 | 2571 | 195 | 9434 | 1549 | 22790 | 3017 | 135 | 929 | 17029 | 2396 | 5917 | 6953 | 5607 | ] |
