This page shows detailed deep learning-derived predictions and motifs for SRF in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | SRF |
| Model ID: | BP001076.1 |
| Cell line/tissue: | Ishikawa |
| Class: | MADS box factors |
| Family: | Responders to external signals (SRF/RLM1) |
| Best Match(es): | MA0083.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P11831 |
| Source: | ENCSR000BTD |
| Model: | BPNet |
| A [ | -1.99e-04 | -2.01e-05 | 2.09e-02 | 1.11e-02 | 5.07e-02 | 2.42e-03 | 4.21e-02 | 1.07e-02 | 3.74e-04 | -1.54e-04 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.17e-02 | 8.62e-02 | -7.34e-04 | -6.32e-04 | -1.04e-04 | -9.54e-04 | -4.78e-05 | 1.43e-04 | 2.06e-05 | -4.47e-05 | ] |
| G [ | -1.08e-04 | 2.91e-05 | 1.23e-04 | -3.25e-04 | -3.00e-04 | -8.46e-04 | -2.07e-04 | -1.50e-03 | 9.94e-02 | 8.72e-02 | ] |
| T [ | -6.86e-04 | 1.78e-03 | 2.17e-03 | 1.91e-02 | 9.83e-05 | 2.92e-02 | 8.02e-04 | 7.39e-03 | 1.34e-06 | -9.99e-05 | ] |
