This page shows detailed deep learning-derived predictions and motifs for CTCF in bipolar neuron using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001078.1 |
| Cell line/tissue: | bipolar neuron |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR066BZZ |
| Model: | BPNet |
| A [ | -6.68e-04 | -2.93e-03 | -2.25e-03 | -2.40e-04 | -4.12e-04 | 2.34e-03 | -7.87e-04 | -4.60e-04 | -2.71e-03 | 1.62e-02 | -2.80e-03 | -4.96e-03 | -1.35e-03 | -2.85e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.13e-02 | 5.44e-02 | -9.44e-04 | 1.11e-01 | 1.54e-01 | 5.26e-02 | 7.88e-02 | 1.65e-01 | 1.93e-03 | -1.53e-03 | 1.44e-02 | 7.56e-03 | -7.25e-04 | -1.86e-03 | ] |
| G [ | 3.09e-02 | -5.71e-04 | 8.28e-02 | -2.84e-04 | 1.79e-06 | -2.13e-04 | -1.86e-04 | -3.58e-05 | -1.15e-04 | 1.45e-02 | 4.20e-02 | 1.09e-03 | 1.42e-01 | 7.45e-02 | ] |
| T [ | -2.68e-03 | 8.95e-03 | -3.47e-03 | -7.28e-04 | -5.34e-04 | -6.45e-03 | 1.17e-02 | -4.82e-04 | 6.47e-02 | -4.36e-03 | -1.24e-03 | 1.81e-02 | -1.86e-03 | -1.99e-03 | ] |
| A [ | 5146 | 2772 | 3746 | 1579 | 186 | 17461 | 465 | 266 | 3571 | 16744 | 1947 | 9229 | 5 | 3396 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 15624 | 23700 | 1211 | 46757 | 48062 | 25097 | 29425 | 47931 | 4793 | 4656 | 19040 | 5040 | 3 | 3075 | ] |
| G [ | 22473 | 2329 | 36862 | 212 | 92 | 1637 | 288 | 70 | 1286 | 18837 | 24166 | 2138 | 48681 | 37231 | ] |
| T [ | 5467 | 19907 | 6891 | 161 | 369 | 4514 | 18531 | 442 | 39059 | 8473 | 3556 | 32302 | 20 | 5008 | ] |
