This page shows detailed deep learning-derived predictions and motifs for CTCF in spleen using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001080.1 |
| Cell line/tissue: | spleen |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR028YEV |
| Model: | BPNet |
| A [ | -7.71e-04 | -2.21e-03 | -2.57e-03 | -1.65e-04 | -3.69e-04 | 6.97e-03 | -3.13e-04 | -2.00e-04 | -2.04e-03 | 1.84e-02 | -1.58e-03 | -4.48e-03 | -4.29e-04 | -2.61e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.39e-03 | 4.45e-02 | -2.77e-04 | 9.83e-02 | 1.43e-01 | 4.68e-02 | 6.10e-02 | 1.58e-01 | 4.56e-04 | -2.07e-03 | 8.55e-03 | 6.25e-03 | -1.89e-04 | -1.77e-03 | ] |
| G [ | 2.32e-02 | -7.27e-04 | 7.67e-02 | 1.63e-05 | -1.43e-05 | 8.06e-05 | -6.86e-05 | -4.18e-05 | -2.39e-04 | 1.33e-02 | 5.67e-02 | -5.87e-04 | 1.66e-01 | 8.80e-02 | ] |
| T [ | -2.02e-03 | 8.90e-03 | -2.27e-03 | -1.08e-03 | -7.21e-04 | -2.93e-03 | 1.84e-02 | -2.68e-04 | 7.42e-02 | -4.21e-03 | -1.32e-03 | 2.78e-02 | -5.05e-04 | -1.03e-03 | ] |
| A [ | 3382 | 1784 | 3013 | 2606 | 267 | 11659 | 388 | 43 | 1881 | 11860 | 1027 | 4373 | 0 | 1961 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 10967 | 16963 | 1406 | 29032 | 33334 | 18765 | 20515 | 33980 | 2597 | 2827 | 11760 | 5061 | 0 | 2015 | ] |
| G [ | 16129 | 1909 | 24718 | 1576 | 157 | 1686 | 378 | 25 | 1127 | 14053 | 19449 | 1495 | 34156 | 27096 | ] |
| T [ | 3680 | 13502 | 5020 | 944 | 399 | 2047 | 12876 | 109 | 28551 | 5417 | 1921 | 23229 | 1 | 3085 | ] |
