Detailed information of deep learning profile BP001081.1

This page shows detailed deep learning-derived predictions and motifs for USF2 in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF2
Model ID: BP001081.1
Cell line/tissue: SK-N-SH
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0526.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15853  
Source: ENCSR945NFL
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.25e-06 7.85e-02 1.83e-06 1.64e-04 -3.39e-05 0.00e+00 3.74e-02 -2.60e-04 ]
C [ 1.08e-01 -8.75e-05 7.41e-02 -1.55e-04 5.90e-06 4.98e-06 -4.47e-04 2.87e-02 ]
G [ 0.00e+00 2.04e-04 -2.52e-04 8.74e-02 -2.26e-05 1.06e-01 -3.20e-04 -4.82e-04 ]
T [ 0.00e+00 -1.45e-04 1.03e-03 -6.06e-08 8.43e-02 -4.98e-06 -5.30e-04 9.47e-04 ]

Frequency matrix

A [ 29 6772 34 648 60 6 3847 414 ]
C [ 7211 122 5742 261 160 23 982 4018 ]
G [ 12 276 414 6339 63 7213 1982 1286 ]
T [ 10 92 1072 14 6979 20 450 1544 ]

11 profiles found for the same TF (USF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001236.1 USF2 ENCSR513UQG IMR-90 Homo sapiens
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