Detailed information of deep learning profile BP001081.1

This page shows detailed deep learning-derived predictions and motifs for USF2 in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF2
Model ID: BP001081.1
Cell line/tissue: SK-N-SH
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0526.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15853  
Source: ENCSR945NFL
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.25e-06 7.85e-02 1.83e-06 1.64e-04 -3.39e-05 0.00e+00 3.74e-02 -2.60e-04 ]
C [ 1.08e-01 -8.75e-05 7.41e-02 -1.55e-04 5.90e-06 4.98e-06 -4.47e-04 2.87e-02 ]
G [ 0.00e+00 2.04e-04 -2.52e-04 8.74e-02 -2.26e-05 1.06e-01 -3.20e-04 -4.82e-04 ]
T [ 0.00e+00 -1.45e-04 1.03e-03 -6.06e-08 8.43e-02 -4.98e-06 -5.30e-04 9.47e-04 ]

Frequency matrix

A [ 29 6772 34 648 60 6 3847 414 ]
C [ 7211 122 5742 261 160 23 982 4018 ]
G [ 12 276 414 6339 63 7213 1982 1286 ]
T [ 10 92 1072 14 6979 20 450 1544 ]

11 profiles found for the same TF (USF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000226.1 USF2 ENCSR000EHG K562 Homo sapiens
BP000417.1 USF2 ENCSR145QNL HepG2 Homo sapiens
BP000448.1 USF2 ENCSR000EEF HepG2 Homo sapiens
BP000548.1 USF2 ENCSR563FBT A549 Homo sapiens
BP000554.1 USF2 ENCSR359NFW K562 Homo sapiens
BP000793.1 USF2 ENCSR000ECW HeLa-S3 Homo sapiens
BP000809.1 USF2 ENCSR000DZU GM12878 Homo sapiens
BP000863.1 USF2 ENCSR578KEN K562 Homo sapiens
BP000966.1 USF2 ENCSR000ECD H1 Homo sapiens
BP001168.1 USF2 ENCSR229QAN WTC11 Homo sapiens
Showing 10 profiles of page 1 from 2 pages