This page shows detailed deep learning-derived predictions and motifs for CTCF in endothelial cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001082.1 |
| Cell line/tissue: | endothelial cell |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR031PXV |
| Model: | BPNet |
| A [ | -6.69e-04 | -3.11e-03 | -2.84e-03 | -5.59e-04 | -2.40e-04 | 2.15e-03 | -4.94e-04 | -1.91e-04 | -2.04e-03 | 1.79e-02 | -1.80e-03 | -5.98e-03 | -5.94e-04 | -2.48e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.47e-03 | 4.24e-02 | 1.52e-05 | 8.81e-02 | 1.47e-01 | 5.47e-02 | 7.40e-02 | 1.61e-01 | 7.82e-04 | -2.06e-03 | 1.07e-02 | 4.74e-03 | -2.42e-04 | -1.68e-03 | ] |
| G [ | 2.01e-02 | 3.44e-04 | 6.54e-02 | 8.34e-04 | -1.22e-05 | -3.26e-04 | -1.32e-04 | -5.27e-05 | -3.30e-04 | 1.59e-02 | 5.63e-02 | 7.67e-05 | 1.52e-01 | 8.97e-02 | ] |
| T [ | -1.97e-03 | 4.97e-03 | -1.83e-03 | -1.48e-03 | -5.13e-04 | -3.81e-03 | 9.27e-03 | -2.61e-04 | 7.26e-02 | -4.91e-03 | -1.24e-03 | 2.40e-02 | -6.31e-04 | -1.45e-03 | ] |
| A [ | 4039 | 2220 | 3305 | 2928 | 194 | 12021 | 383 | 104 | 1890 | 13386 | 1029 | 5037 | 5 | 2002 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 10951 | 17975 | 1581 | 31311 | 36307 | 21430 | 23386 | 36517 | 2462 | 2703 | 12516 | 4558 | 3 | 1862 | ] |
| G [ | 17579 | 2645 | 26329 | 1557 | 105 | 1316 | 247 | 60 | 948 | 15348 | 21214 | 1698 | 36857 | 29861 | ] |
| T [ | 4309 | 14039 | 5664 | 1082 | 273 | 2113 | 12863 | 198 | 31579 | 5442 | 2120 | 25586 | 14 | 3154 | ] |
