This page shows detailed deep learning-derived predictions and motifs for CTCF in gastroesophageal sphincter using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001083.1 |
| Cell line/tissue: | gastroesophageal sphincter |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR661XNQ |
| Model: | BPNet |
| A [ | -5.60e-04 | -1.73e-03 | -1.72e-03 | -3.39e-04 | -4.14e-04 | 1.85e-03 | -2.83e-04 | -1.75e-04 | -1.37e-03 | 1.36e-02 | -1.17e-03 | -3.32e-03 | -2.55e-04 | -1.73e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.20e-03 | 3.08e-02 | 1.11e-06 | 6.37e-02 | 1.04e-01 | 3.23e-02 | 4.69e-02 | 1.19e-01 | 4.87e-04 | -1.54e-03 | 7.89e-03 | 5.55e-03 | -1.08e-04 | -1.05e-03 | ] |
| G [ | 1.57e-02 | -1.95e-04 | 5.09e-02 | 3.85e-04 | -3.73e-05 | 2.29e-04 | 1.77e-05 | -2.77e-05 | -1.02e-04 | 1.23e-02 | 4.77e-02 | -3.84e-04 | 1.24e-01 | 6.69e-02 | ] |
| T [ | -1.59e-03 | 5.62e-03 | -1.35e-03 | -8.25e-04 | -6.07e-04 | -2.08e-03 | 1.09e-02 | -2.65e-04 | 5.15e-02 | -3.64e-03 | -1.07e-03 | 2.04e-02 | -3.80e-04 | -1.11e-03 | ] |
| A [ | 3849 | 2394 | 3290 | 2990 | 490 | 11052 | 473 | 19 | 1888 | 11942 | 913 | 4627 | 3 | 1793 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11127 | 16419 | 1977 | 27775 | 33317 | 18794 | 21562 | 34705 | 2447 | 2835 | 11579 | 6079 | 1 | 1858 | ] |
| G [ | 15642 | 2957 | 23873 | 2400 | 419 | 2313 | 492 | 9 | 1226 | 14972 | 20629 | 1311 | 34751 | 28171 | ] |
| T [ | 4150 | 12998 | 5629 | 1602 | 542 | 2608 | 12241 | 35 | 29207 | 5020 | 1647 | 22752 | 13 | 2946 | ] |
