This page shows detailed deep learning-derived predictions and motifs for CTCF in gastroesophageal sphincter using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001084.1 |
| Cell line/tissue: | gastroesophageal sphincter |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR206ETG |
| Model: | BPNet |
| A [ | -1.10e-03 | -2.51e-03 | -2.53e-03 | -3.26e-04 | -6.37e-04 | 4.95e-03 | -3.77e-04 | -2.66e-04 | -2.13e-03 | 1.66e-02 | -1.79e-03 | -4.50e-03 | -3.65e-04 | -2.65e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.12e-02 | 4.62e-02 | -3.15e-04 | 9.42e-02 | 1.50e-01 | 4.58e-02 | 6.33e-02 | 1.63e-01 | 6.32e-04 | -1.89e-03 | 1.35e-02 | 6.33e-03 | -1.73e-04 | -1.53e-03 | ] |
| G [ | 2.45e-02 | -2.60e-04 | 7.60e-02 | 8.59e-05 | -2.80e-05 | 1.33e-04 | -3.55e-05 | -2.86e-05 | -1.87e-04 | 1.65e-02 | 6.05e-02 | -7.19e-04 | 1.69e-01 | 8.76e-02 | ] |
| T [ | -2.43e-03 | 7.08e-03 | -2.43e-03 | -1.22e-03 | -8.44e-04 | -3.31e-03 | 1.75e-02 | -3.68e-04 | 7.43e-02 | -4.68e-03 | -1.93e-03 | 2.57e-02 | -4.94e-04 | -1.22e-03 | ] |
| A [ | 4362 | 2605 | 3724 | 3389 | 456 | 12803 | 474 | 21 | 2131 | 13548 | 1174 | 5554 | 0 | 2223 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 12228 | 17874 | 2061 | 31241 | 37362 | 21002 | 23094 | 38572 | 2791 | 3198 | 13070 | 5615 | 0 | 2168 | ] |
| G [ | 17540 | 2963 | 26394 | 2303 | 270 | 1837 | 408 | 19 | 1075 | 15794 | 22365 | 1543 | 38645 | 30719 | ] |
| T [ | 4515 | 15203 | 6466 | 1712 | 557 | 3003 | 14669 | 33 | 32648 | 6104 | 2036 | 25933 | 0 | 3536 | ] |
