This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001086.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR351SWL |
| Model: | BPNet |
| A [ | -1.78e-03 | -8.82e-04 | 2.82e-02 | -2.10e-03 | -5.87e-03 | 7.66e-02 | -3.62e-04 | 2.25e-02 | -3.37e-03 | -6.86e-04 | -1.30e-03 | -3.64e-03 | 1.12e-02 | -3.57e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.09e-02 | 1.79e-01 | -7.42e-04 | 6.89e-02 | 1.70e-02 | -5.26e-05 | -4.35e-05 | 2.21e-05 | 3.73e-04 | 3.90e-06 | -1.17e-04 | 1.09e-01 | -1.02e-03 | 3.43e-02 | ] |
| G [ | -1.87e-03 | -2.88e-04 | 8.41e-03 | 1.33e-02 | -2.11e-03 | 4.72e-04 | 1.92e-01 | 6.85e-02 | 5.61e-02 | 1.81e-01 | 1.27e-01 | -8.07e-04 | 6.24e-02 | 1.58e-02 | ] |
| T [ | -2.82e-03 | -6.25e-04 | -6.11e-03 | -1.99e-03 | 1.93e-02 | -2.38e-03 | -3.11e-04 | -3.89e-04 | 7.28e-03 | -4.10e-04 | -7.05e-04 | -3.57e-03 | -3.42e-03 | -1.58e-03 | ] |
| A [ | 3316 | 370 | 22727 | 1920 | 5294 | 28032 | 101 | 13596 | 1602 | 444 | 766 | 4525 | 13862 | 3212 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 25835 | 33162 | 1511 | 19278 | 13222 | 1223 | 16 | 322 | 1496 | 112 | 1187 | 25632 | 1457 | 16772 | ] |
| G [ | 2370 | 167 | 5335 | 11572 | 2880 | 2585 | 33669 | 19592 | 18503 | 32997 | 29117 | 1006 | 16941 | 10628 | ] |
| T [ | 2304 | 127 | 4253 | 1056 | 12430 | 1985 | 40 | 316 | 12225 | 273 | 2756 | 2663 | 1566 | 3214 | ] |
