This page shows detailed deep learning-derived predictions and motifs for CTCF in right lobe of liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001088.1 |
| Cell line/tissue: | right lobe of liver |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR839NFL |
| Model: | BPNet |
| A [ | -1.54e-03 | -3.53e-03 | -3.05e-03 | -4.45e-04 | -5.26e-04 | 7.48e-03 | -6.16e-04 | -2.80e-04 | -2.33e-03 | 1.86e-02 | -2.12e-03 | -6.09e-03 | -4.83e-04 | -2.87e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.11e-02 | 5.38e-02 | -3.25e-04 | 1.04e-01 | 1.63e-01 | 5.22e-02 | 7.03e-02 | 1.78e-01 | 5.91e-04 | -2.22e-03 | 1.32e-02 | 6.58e-03 | -3.62e-04 | -2.06e-03 | ] |
| G [ | 2.99e-02 | -2.71e-04 | 8.72e-02 | 7.11e-04 | -1.12e-04 | -4.16e-04 | -1.41e-04 | -8.05e-05 | -2.41e-04 | 1.65e-02 | 5.57e-02 | -2.69e-04 | 1.72e-01 | 8.84e-02 | ] |
| T [ | -2.81e-03 | 9.90e-03 | -3.46e-03 | -1.52e-03 | -8.24e-04 | -4.43e-03 | 1.68e-02 | -3.81e-04 | 7.26e-02 | -5.69e-03 | -2.21e-03 | 2.18e-02 | -7.39e-04 | -1.75e-03 | ] |
| A [ | 4812 | 2466 | 4024 | 3848 | 569 | 15825 | 561 | 219 | 2748 | 16379 | 1410 | 6316 | 4 | 2841 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 13498 | 21081 | 1858 | 36864 | 42852 | 24267 | 26256 | 43666 | 3628 | 3681 | 15375 | 5618 | 2 | 2702 | ] |
| G [ | 21433 | 2733 | 31628 | 2254 | 243 | 1640 | 466 | 83 | 1361 | 17504 | 24968 | 2053 | 44327 | 34724 | ] |
| T [ | 4598 | 18060 | 6830 | 1375 | 676 | 2609 | 17057 | 372 | 36603 | 6777 | 2586 | 30353 | 7 | 4073 | ] |
