This page shows detailed deep learning-derived predictions and motifs for CTCF in endothelial cell of umbilical vein using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001089.1 |
| Cell line/tissue: | endothelial cell of umbilical vein |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DLW |
| Model: | BPNet |
| A [ | -1.38e-03 | -4.73e-03 | -3.68e-03 | -6.95e-04 | -6.95e-04 | 6.11e-03 | -9.06e-04 | -5.25e-04 | -2.89e-03 | 2.23e-02 | -3.01e-03 | -7.84e-03 | -1.08e-03 | -3.59e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.09e-02 | 7.09e-02 | -7.11e-04 | 1.47e-01 | 2.15e-01 | 7.44e-02 | 1.04e-01 | 2.16e-01 | 7.92e-04 | -3.01e-03 | 1.37e-02 | 6.96e-03 | -7.15e-04 | -2.61e-03 | ] |
| G [ | 4.27e-02 | -1.15e-04 | 1.14e-01 | 2.99e-04 | -1.05e-04 | -7.46e-04 | -3.67e-04 | -1.65e-04 | -6.38e-04 | 1.80e-02 | 6.26e-02 | 3.74e-04 | 2.04e-01 | 1.05e-01 | ] |
| T [ | -3.16e-03 | 9.86e-03 | -5.19e-03 | -2.34e-03 | -1.26e-03 | -6.36e-03 | 1.75e-02 | -3.21e-04 | 8.83e-02 | -6.00e-03 | -2.03e-03 | 3.13e-02 | -1.46e-03 | -2.49e-03 | ] |
| A [ | 4045 | 2152 | 2518 | 3762 | 113 | 15647 | 317 | 40 | 2825 | 14410 | 1484 | 5801 | 0 | 2383 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11641 | 17057 | 665 | 31960 | 37446 | 18322 | 22435 | 37652 | 3201 | 3236 | 13497 | 3546 | 1 | 1724 | ] |
| G [ | 18291 | 1565 | 30896 | 1076 | 37 | 1079 | 199 | 11 | 895 | 13524 | 20388 | 1413 | 37782 | 30337 | ] |
| T [ | 3807 | 17011 | 3705 | 986 | 188 | 2735 | 14833 | 81 | 30864 | 6614 | 2415 | 27023 | 1 | 3340 | ] |
