Detailed information of deep learning profile BP001090.1

This page shows detailed deep learning-derived predictions and motifs for MEF2A in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MEF2A
Model ID: BP001090.1
Cell line/tissue: SK-N-SH
Class: MADS box factors
Family: Regulators of differentiation
Best Match(es): MA0052.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q02078  
Source: ENCSR000BVC
Model: BPNet

Contribution weight matrix (CWM)

A [ -6.10e-04 -3.90e-04 1.33e-06 5.02e-02 9.93e-04 1.23e-03 5.96e-04 3.93e-03 -5.03e-04 2.99e-02 -5.70e-04 2.41e-03 ]
C [ -7.50e-04 2.74e-02 1.52e-04 -8.05e-06 -2.26e-05 -1.30e-04 -1.80e-04 -2.65e-04 -2.45e-04 0.00e+00 -3.84e-04 5.83e-03 ]
G [ 5.57e-03 -2.95e-04 -4.24e-07 -2.12e-05 -3.85e-06 -1.95e-04 -2.66e-05 -1.37e-04 -3.64e-04 9.15e-03 2.60e-02 -8.17e-04 ]
T [ 2.84e-03 1.16e-04 5.34e-02 -6.37e-05 3.73e-02 2.80e-02 2.76e-02 1.61e-02 2.92e-02 -6.13e-05 -5.12e-04 -1.09e-03 ]

Frequency matrix

A [ 3234 1636 23 16136 1582 2020 1637 3733 2743 11444 3008 6311 ]
C [ 1575 9885 403 36 45 321 990 1571 708 93 1043 5137 ]
G [ 5456 1225 8 77 25 190 74 367 1251 5108 10074 2056 ]
T [ 6717 4236 16548 733 15330 14451 14281 11310 12280 337 2857 3479 ]

2 profiles found for the same TF (MEF2A) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000262.1 MEF2A ENCSR000BNV K562 Homo sapiens
BP001102.1 MEF2A ENCSR000BKB GM12878 Homo sapiens
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