Detailed information of deep learning profile BP001090.1

This page shows detailed deep learning-derived predictions and motifs for MEF2A in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MEF2A
Model ID: BP001090.1
Cell line/tissue: SK-N-SH
Class: MADS box factors
Family: Regulators of differentiation
Best Match(es): MA0052.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q02078  
Source: ENCSR000BVC
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.09e-03 -5.12e-04 -6.13e-05 2.92e-02 1.61e-02 2.76e-02 2.80e-02 3.73e-02 -6.37e-05 5.34e-02 1.16e-04 2.84e-03 ]
C [ -8.17e-04 2.60e-02 9.15e-03 -3.64e-04 -1.37e-04 -2.66e-05 -1.95e-04 -3.85e-06 -2.12e-05 -4.24e-07 -2.95e-04 5.57e-03 ]
G [ 5.83e-03 -3.84e-04 0.00e+00 -2.45e-04 -2.65e-04 -1.80e-04 -1.30e-04 -2.26e-05 -8.05e-06 1.52e-04 2.74e-02 -7.50e-04 ]
T [ 2.41e-03 -5.70e-04 2.99e-02 -5.03e-04 3.93e-03 5.96e-04 1.23e-03 9.93e-04 5.02e-02 1.33e-06 -3.90e-04 -6.10e-04 ]

Frequency matrix

A [ 3479 2857 337 12280 11310 14281 14451 15330 733 16548 4236 6717 ]
C [ 2056 10074 5108 1251 367 74 190 25 77 8 1225 5456 ]
G [ 5137 1043 93 708 1571 990 321 45 36 403 9885 1575 ]
T [ 6311 3008 11444 2743 3733 1637 2020 1582 16136 23 1636 3234 ]

2 profiles found for the same TF (MEF2A) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000262.1 MEF2A ENCSR000BNV K562 Homo sapiens
BP001102.1 MEF2A ENCSR000BKB GM12878 Homo sapiens
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