This page shows detailed deep learning-derived predictions and motifs for CTCF in GM12875 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001092.1 |
| Cell line/tissue: | GM12875 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DRU |
| Model: | BPNet |
| A [ | -1.19e-03 | -3.28e-03 | -3.65e-03 | -1.13e-03 | -8.00e-04 | 2.90e-03 | -6.90e-04 | -3.28e-04 | -2.48e-03 | 2.07e-02 | -1.99e-03 | -6.09e-03 | -6.30e-04 | -2.96e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.00e-02 | 5.06e-02 | 7.54e-04 | 9.72e-02 | 1.65e-01 | 5.94e-02 | 7.93e-02 | 1.81e-01 | 1.25e-03 | -2.32e-03 | 1.19e-02 | 6.64e-03 | -4.64e-04 | -1.41e-03 | ] |
| G [ | 3.09e-02 | 9.02e-04 | 8.23e-02 | 2.32e-03 | -1.38e-04 | -2.71e-04 | -1.26e-04 | -1.10e-04 | -4.15e-04 | 1.47e-02 | 6.06e-02 | 3.08e-04 | 1.79e-01 | 1.00e-01 | ] |
| T [ | -3.02e-03 | 4.37e-03 | -3.23e-03 | -2.28e-03 | -1.15e-03 | -4.80e-03 | 1.08e-02 | -4.40e-04 | 7.23e-02 | -4.97e-03 | -1.83e-03 | 2.16e-02 | -1.28e-03 | -2.42e-03 | ] |
| A [ | 6027 | 3548 | 4999 | 4416 | 927 | 15364 | 854 | 237 | 3544 | 18417 | 1614 | 8176 | 284 | 2886 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 14918 | 24644 | 3236 | 40300 | 48732 | 30027 | 33306 | 50470 | 4704 | 4601 | 17616 | 7982 | 298 | 3166 | ] |
| G [ | 24559 | 4804 | 34863 | 4131 | 653 | 2360 | 613 | 117 | 1786 | 20780 | 28856 | 3002 | 49725 | 40927 | ] |
| T [ | 5708 | 18217 | 8116 | 2366 | 902 | 3463 | 16440 | 389 | 41179 | 7414 | 3126 | 32053 | 906 | 4235 | ] |