Detailed information of deep learning profile BP001093.1

This page shows detailed deep learning-derived predictions and motifs for RUNX1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: RUNX1
Model ID: BP001093.1
Cell line/tissue: K562
Class: Runt domain factors
Family: Runt-related factors
Best Match(es): MA0002.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q03347  
Source: ENCSR414TYY
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.97e-03 1.07e-02 2.90e-02 1.60e-06 0.00e+00 1.06e-02 0.00e+00 1.94e-02 4.21e-03 ]
C [ 9.89e-05 -2.71e-04 -2.83e-05 3.99e-02 3.79e-02 0.00e+00 3.73e-02 -4.27e-05 -2.81e-04 ]
G [ -4.53e-04 1.87e-03 1.19e-04 0.00e+00 2.46e-06 1.19e-02 2.68e-06 -6.11e-06 2.14e-03 ]
T [ 4.73e-03 -4.95e-05 -2.17e-06 7.96e-06 0.00e+00 -5.61e-05 8.09e-07 -3.46e-05 -1.90e-04 ]

Frequency matrix

A [ 3215 4596 7210 15 68 5015 16 7351 3066 ]
C [ 1890 990 649 9284 9270 61 9303 652 1034 ]
G [ 887 3139 1461 19 49 3856 56 707 4237 ]
T [ 3408 674 80 81 12 467 24 689 1062 ]

1 profiles found for the same TF (RUNX1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000437.1 RUNX1 ENCSR588AKU K562 Homo sapiens
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