This page shows detailed deep learning-derived predictions and motifs for CTCF in CD4-positive and alpha-beta T cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001095.1 |
| Cell line/tissue: | CD4-positive and alpha-beta T cell |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR470KCE |
| Model: | BPNet |
| A [ | -8.00e-04 | -2.40e-03 | -2.68e-03 | 2.77e-05 | -3.96e-04 | 8.20e-03 | -3.56e-04 | -1.87e-04 | -1.56e-03 | 1.72e-02 | -1.56e-03 | -4.09e-03 | -5.10e-04 | -2.03e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.23e-03 | 5.03e-02 | -1.63e-04 | 1.03e-01 | 1.53e-01 | 4.68e-02 | 6.55e-02 | 1.54e-01 | 7.19e-05 | -2.27e-03 | 8.82e-03 | 6.43e-03 | -3.32e-04 | -1.72e-03 | ] |
| G [ | 2.81e-02 | -2.98e-04 | 8.17e-02 | 1.19e-04 | -1.12e-04 | -1.50e-04 | -9.07e-05 | -5.57e-05 | -1.80e-04 | 1.50e-02 | 5.35e-02 | -4.17e-04 | 1.52e-01 | 7.96e-02 | ] |
| T [ | -2.45e-03 | 8.22e-03 | -2.48e-03 | -1.18e-03 | -5.33e-04 | -2.93e-03 | 1.83e-02 | -2.38e-04 | 7.32e-02 | -4.18e-03 | -1.11e-03 | 2.30e-02 | -6.62e-04 | -1.54e-03 | ] |
| A [ | 3230 | 1624 | 2695 | 2596 | 349 | 11255 | 402 | 148 | 1898 | 11537 | 1015 | 4397 | 283 | 2113 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 10013 | 16969 | 1374 | 28103 | 32220 | 18543 | 20591 | 32607 | 2612 | 2990 | 11058 | 5470 | 333 | 2362 | ] |
| G [ | 16610 | 1870 | 24542 | 1536 | 176 | 1534 | 323 | 113 | 1274 | 13667 | 19056 | 1930 | 31840 | 25617 | ] |
| T [ | 3305 | 12694 | 4545 | 922 | 412 | 1825 | 11841 | 289 | 27373 | 4963 | 2029 | 21360 | 701 | 3065 | ] |