This page shows detailed deep learning-derived predictions and motifs for HNF4A in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | HNF4A |
| Model ID: | BP001100.1 |
| Cell line/tissue: | HepG2 |
| Class: | Nuclear receptors with C4 zinc fingers |
| Family: | RXR-related receptors (NR2) |
| Best Match(es): | MA0114.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P41235 |
| Source: | ENCSR000BLF |
| Model: | BPNet |
| A [ | -3.77e-03 | 6.43e-04 | 1.40e-02 | 5.12e-02 | -4.52e-05 | -3.87e-04 | -8.18e-04 | -4.43e-04 | 1.17e-04 | 6.90e-03 | 1.34e-02 | -1.75e-03 | -3.12e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.84e-03 | -5.83e-04 | -1.68e-03 | 9.34e-03 | 1.35e-01 | 6.52e-04 | -1.11e-03 | 4.36e-04 | -5.34e-04 | -1.79e-03 | 5.45e-03 | 7.73e-02 | 1.33e-02 | ] |
| G [ | -1.69e-03 | 9.29e-02 | 2.14e-02 | -9.69e-04 | -3.69e-05 | -8.82e-05 | -5.89e-04 | -5.03e-04 | 9.48e-02 | 8.42e-03 | -2.49e-03 | -1.04e-03 | -4.42e-04 | ] |
| T [ | 3.81e-02 | -4.82e-04 | -1.66e-03 | -1.22e-03 | -3.15e-05 | 7.39e-02 | 7.02e-02 | 9.24e-02 | -2.50e-04 | -3.37e-03 | -1.79e-03 | -1.12e-03 | 9.32e-03 | ] |
| A [ | 4501 | 3870 | 12736 | 21630 | 0 | 695 | 1334 | 519 | 2523 | 11063 | 12553 | 3328 | 5364 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 3642 | 629 | 5014 | 9413 | 35902 | 3729 | 6305 | 1265 | 840 | 7912 | 11379 | 26696 | 13069 | ] |
| G [ | 3020 | 30819 | 15427 | 1188 | 0 | 159 | 1113 | 497 | 31980 | 10414 | 4120 | 1572 | 2296 | ] |
| T [ | 24738 | 584 | 2726 | 3672 | 0 | 31319 | 27149 | 33621 | 559 | 6513 | 7850 | 4305 | 15172 | ] |
