Detailed information of deep learning profile BP001102.1

This page shows detailed deep learning-derived predictions and motifs for MEF2A in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MEF2A
Model ID: BP001102.1
Cell line/tissue: GM12878
Class: MADS box factors
Family: Regulators of differentiation
Best Match(es): MA0052.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q02078  
Source: ENCSR000BKB
Model: BPNet

Contribution weight matrix (CWM)

A [ -9.34e-04 -1.15e-03 -3.00e-06 5.54e-02 1.97e-03 2.08e-03 8.26e-04 5.83e-03 -1.03e-03 5.07e-02 -3.83e-04 2.94e-03 ]
C [ -9.96e-04 3.28e-02 3.30e-04 -5.95e-05 -7.83e-05 -3.44e-04 -4.88e-04 -5.11e-04 -2.92e-04 0.00e+00 -5.22e-04 6.81e-03 ]
G [ 7.72e-03 -8.07e-04 0.00e+00 -5.01e-05 -4.81e-05 -2.92e-04 -7.83e-05 -2.13e-04 -2.87e-04 1.40e-05 3.18e-02 -1.36e-03 ]
T [ 3.33e-03 4.89e-04 6.39e-02 -2.31e-04 3.66e-02 3.15e-02 3.52e-02 1.89e-02 3.73e-02 9.21e-06 -1.65e-03 -1.05e-03 ]

Frequency matrix

A [ 3132 1665 22 17732 2384 2619 2044 5102 2042 18976 3730 6828 ]
C [ 1818 10570 499 104 120 306 814 684 801 10 1103 5637 ]
G [ 5949 2713 6 262 128 320 103 245 770 246 12369 1829 ]
T [ 8378 4330 18750 1179 16645 16032 16315 13245 15664 45 2076 4983 ]

Alternative motif patterns (AMPs)

2 profiles found for the same TF (MEF2A) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000262.1 MEF2A ENCSR000BNV K562 Homo sapiens
BP001090.1 MEF2A ENCSR000BVC SK-N-SH Homo sapiens
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