Detailed information of deep learning profile BP001102.1

This page shows detailed deep learning-derived predictions and motifs for MEF2A in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MEF2A
Model ID: BP001102.1
Cell line/tissue: GM12878
Class: MADS box factors
Family: Regulators of differentiation
Best Match(es): MA0052.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q02078  
Source: ENCSR000BKB
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.05e-03 -1.65e-03 9.21e-06 3.73e-02 1.89e-02 3.52e-02 3.15e-02 3.66e-02 -2.31e-04 6.39e-02 4.89e-04 3.33e-03 ]
C [ -1.36e-03 3.18e-02 1.40e-05 -2.87e-04 -2.13e-04 -7.83e-05 -2.92e-04 -4.81e-05 -5.01e-05 0.00e+00 -8.07e-04 7.72e-03 ]
G [ 6.81e-03 -5.22e-04 0.00e+00 -2.92e-04 -5.11e-04 -4.88e-04 -3.44e-04 -7.83e-05 -5.95e-05 3.30e-04 3.28e-02 -9.96e-04 ]
T [ 2.94e-03 -3.83e-04 5.07e-02 -1.03e-03 5.83e-03 8.26e-04 2.08e-03 1.97e-03 5.54e-02 -3.00e-06 -1.15e-03 -9.34e-04 ]

Frequency matrix

A [ 4983 2076 45 15664 13245 16315 16032 16645 1179 18750 4330 8378 ]
C [ 1829 12369 246 770 245 103 320 128 262 6 2713 5949 ]
G [ 5637 1103 10 801 684 814 306 120 104 499 10570 1818 ]
T [ 6828 3730 18976 2042 5102 2044 2619 2384 17732 22 1665 3132 ]

Alternative motif patterns (AMPs)

2 profiles found for the same TF (MEF2A) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000262.1 MEF2A ENCSR000BNV K562 Homo sapiens
BP001090.1 MEF2A ENCSR000BVC SK-N-SH Homo sapiens
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