This page shows detailed deep learning-derived predictions and motifs for CTCF in bronchial epithelial cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001103.1 |
| Cell line/tissue: | bronchial epithelial cell |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DXI |
| Model: | BPNet |
| A [ | -1.29e-03 | -4.66e-03 | -5.06e-03 | -1.55e-03 | -1.26e-03 | 6.09e-03 | -1.06e-03 | -4.87e-04 | -3.26e-03 | 2.40e-02 | -3.46e-03 | -8.19e-03 | -7.62e-04 | -4.32e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.57e-02 | 7.63e-02 | 5.75e-04 | 1.48e-01 | 2.40e-01 | 7.45e-02 | 1.14e-01 | 2.70e-01 | 1.58e-03 | -2.94e-03 | 2.02e-02 | 9.58e-03 | -5.97e-04 | -2.55e-03 | ] |
| G [ | 4.40e-02 | 7.75e-04 | 1.17e-01 | 2.25e-03 | -7.98e-05 | -1.28e-04 | -1.74e-04 | -1.31e-04 | -2.85e-04 | 2.73e-02 | 8.60e-02 | 3.67e-04 | 2.59e-01 | 1.40e-01 | ] |
| T [ | -4.67e-03 | 7.50e-03 | -4.62e-03 | -3.00e-03 | -1.60e-03 | -7.28e-03 | 1.80e-02 | -6.99e-04 | 1.02e-01 | -8.03e-03 | -2.44e-03 | 3.06e-02 | -1.20e-03 | -3.28e-03 | ] |
| A [ | 5627 | 3193 | 4732 | 4124 | 503 | 16864 | 670 | 44 | 3384 | 17458 | 1542 | 8203 | 5 | 3172 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 15126 | 24764 | 2309 | 41551 | 49167 | 26899 | 31061 | 50340 | 4286 | 4602 | 18321 | 6989 | 7 | 3400 | ] |
| G [ | 24273 | 3507 | 35144 | 2973 | 177 | 2446 | 499 | 16 | 1484 | 20737 | 27617 | 2391 | 50451 | 39230 | ] |
| T [ | 5470 | 19032 | 8311 | 1848 | 649 | 4287 | 18267 | 96 | 41342 | 7699 | 3016 | 32912 | 33 | 4694 | ] |
