Detailed information of deep learning profile BP001105.1

This page shows detailed deep learning-derived predictions and motifs for E2F8 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E2F8
Model ID: BP001105.1
Cell line/tissue: MCF-7
Class: Fork head/winged helix factors
Family: E2F
Best Match(es): MA0865.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: A0AVK6  
Source: ENCSR897ZXU
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.04e-04 2.53e-05 -6.46e-05 -5.07e-05 -1.21e-05 0.00e+00 0.00e+00 -2.12e-05 2.86e-05 5.23e-03 ]
C [ -4.98e-04 1.25e-04 -8.98e-06 1.37e-02 1.03e-02 3.25e-02 0.00e+00 2.16e-02 6.10e-03 9.87e-04 ]
G [ -3.09e-04 -3.97e-05 3.72e-05 -8.40e-06 2.39e-03 1.91e-05 3.45e-02 2.85e-04 6.29e-03 2.04e-04 ]
T [ 6.69e-03 1.00e-02 1.79e-02 3.53e-04 -2.60e-05 0.00e+00 0.00e+00 5.79e-05 -1.38e-05 -5.51e-04 ]

Frequency matrix

A [ 1918 1213 456 814 893 0 0 390 802 2447 ]
C [ 2057 2398 835 4070 4760 8310 7 5535 3252 2276 ]
G [ 1886 1613 592 1555 1886 1 8300 1446 3133 1964 ]
T [ 2449 3086 6428 1872 772 0 4 941 1124 1624 ]

3 profiles found for the same TF (E2F8) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000667.1 E2F8 ENCSR634GEO HepG2 Homo sapiens
BP000729.1 E2F8 ENCSR953DVM K562 Homo sapiens
BP000961.1 E2F8 ENCSR793HVL GM12878 Homo sapiens
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