This page shows detailed deep learning-derived predictions and motifs for CTCF in fibroblast of mammary gland using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001106.1 |
| Cell line/tissue: | fibroblast of mammary gland |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DUU |
| Model: | BPNet |
| A [ | -1.30e-03 | -4.67e-03 | -4.70e-03 | -1.39e-03 | -1.27e-03 | 2.69e-03 | -1.14e-03 | -4.83e-04 | -3.49e-03 | 2.60e-02 | -2.99e-03 | -7.94e-03 | -1.23e-03 | -4.19e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.34e-02 | 6.11e-02 | 3.28e-04 | 1.36e-01 | 2.19e-01 | 7.79e-02 | 1.05e-01 | 2.39e-01 | 1.58e-03 | -3.45e-03 | 1.52e-02 | 6.88e-03 | -5.62e-04 | -2.97e-03 | ] |
| G [ | 3.41e-02 | 8.41e-04 | 9.65e-02 | 1.54e-03 | -1.79e-04 | -5.11e-04 | -2.67e-04 | -1.61e-04 | -3.79e-04 | 2.41e-02 | 8.09e-02 | 2.97e-04 | 2.33e-01 | 1.30e-01 | ] |
| T [ | -3.60e-03 | 6.38e-03 | -4.23e-03 | -3.11e-03 | -1.78e-03 | -7.62e-03 | 1.58e-02 | -4.97e-04 | 1.01e-01 | -6.83e-03 | -2.94e-03 | 2.98e-02 | -1.90e-03 | -2.22e-03 | ] |
| A [ | 5230 | 3089 | 4370 | 2921 | 740 | 16280 | 477 | 263 | 2978 | 18051 | 1686 | 7513 | 337 | 3172 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 14669 | 22259 | 1517 | 42628 | 45905 | 25797 | 28844 | 46820 | 3995 | 3621 | 16303 | 5723 | 234 | 2937 | ] |
| G [ | 22247 | 2669 | 33800 | 1162 | 175 | 1652 | 315 | 83 | 1138 | 17993 | 26424 | 2199 | 45832 | 36628 | ] |
| T [ | 5457 | 19586 | 7915 | 892 | 783 | 3875 | 17967 | 437 | 39492 | 7939 | 3190 | 32167 | 1200 | 4866 | ] |