Detailed information of deep learning profile BP001109.1

This page shows detailed deep learning-derived predictions and motifs for NRF1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NRF1
Model ID: BP001109.1
Cell line/tissue: HepG2
Class: Uncharacterized
Family: NRF
Best Match(es): MA0506.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q5ZL67  
Source: ENCSR000EEH
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.22e-03 5.01e-04 -6.08e-05 -1.81e-05 -2.22e-06 5.41e-02 -1.87e-03 -1.14e-04 -4.34e-04 -1.72e-04 -1.95e-04 9.57e-03 ]
C [ 1.89e-03 -5.63e-05 8.47e-02 -6.15e-06 7.20e-02 -1.81e-04 -1.02e-03 -6.17e-04 6.27e-02 -1.16e-03 4.36e-02 -2.40e-03 ]
G [ -2.39e-03 6.45e-02 -2.57e-05 8.91e-02 -6.79e-05 1.21e-04 -6.49e-03 5.74e-02 -2.58e-04 5.33e-02 -6.06e-04 2.61e-03 ]
T [ 1.86e-02 -1.16e-05 -1.89e-05 -1.96e-05 1.64e-05 -5.87e-05 1.60e-02 -2.16e-04 -3.67e-04 -1.02e-03 1.15e-03 -1.34e-03 ]

Frequency matrix

A [ 559 498 53 19 30 5527 601 323 292 322 313 2146 ]
C [ 1970 37 6831 1 6677 494 1132 716 5560 788 4940 1616 ]
G [ 1079 6347 15 6878 77 684 2521 5557 456 4987 665 2286 ]
T [ 3298 24 7 8 122 201 2652 310 598 809 988 857 ]

11 profiles found for the same TF (NRF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000371.1 NRF1 ENCSR000EHH K562 Homo sapiens
BP000443.1 NRF1 ENCSR135ANT MCF-7 Homo sapiens
BP000502.1 NRF1 ENCSR689JMY HepG2 Homo sapiens
BP000505.1 NRF1 ENCSR998AJK K562 Homo sapiens
BP000575.1 NRF1 ENCSR000EDJ HeLa-S3 Homo sapiens
BP000586.1 NRF1 ENCSR837EYC K562 Homo sapiens
BP000819.1 NRF1 ENCSR000DZO GM12878 Homo sapiens
BP000972.1 NRF1 ENCSR494TDU K562 Homo sapiens
BP001112.1 NRF1 ENCSR000ECC H1 Homo sapiens
BP001198.1 NRF1 ENCSR000EHZ SK-N-SH Homo sapiens
Showing 10 profiles of page 1 from 2 pages