This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001110.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR062JAC |
| Model: | BPNet |
| A [ | -2.13e-03 | -7.12e-04 | 2.99e-02 | -2.13e-03 | -5.90e-03 | 7.84e-02 | -4.64e-04 | 1.95e-02 | -4.12e-03 | -7.86e-04 | -1.55e-03 | -3.89e-03 | 7.70e-03 | -4.00e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.98e-02 | 1.94e-01 | -7.45e-04 | 7.08e-02 | 1.71e-02 | 9.03e-06 | -6.20e-06 | 2.18e-05 | 5.14e-04 | -3.27e-05 | 2.50e-04 | 1.08e-01 | -7.59e-04 | 3.61e-02 | ] |
| G [ | -1.63e-03 | -2.92e-04 | 8.29e-03 | 1.37e-02 | -2.05e-03 | 8.85e-04 | 1.97e-01 | 7.41e-02 | 5.89e-02 | 1.91e-01 | 1.34e-01 | -6.78e-04 | 6.50e-02 | 1.58e-02 | ] |
| T [ | -3.27e-03 | -6.73e-04 | -6.61e-03 | -2.27e-03 | 1.99e-02 | -2.70e-03 | -3.39e-04 | -5.08e-04 | 8.46e-03 | -5.13e-04 | -6.27e-04 | -3.50e-03 | -3.97e-03 | -1.75e-03 | ] |
| A [ | 3620 | 22 | 25655 | 2143 | 6167 | 31078 | 382 | 15018 | 2124 | 349 | 1088 | 5506 | 15591 | 3790 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 29787 | 38545 | 1857 | 22083 | 14877 | 1597 | 82 | 612 | 1982 | 102 | 1721 | 28484 | 2051 | 18446 | ] |
| G [ | 2593 | 12 | 6028 | 13133 | 3505 | 3444 | 37925 | 22499 | 20953 | 37889 | 32564 | 1459 | 18982 | 12407 | ] |
| T [ | 2588 | 9 | 5048 | 1228 | 14039 | 2469 | 199 | 459 | 13529 | 248 | 3215 | 3139 | 1964 | 3945 | ] |
