Detailed information of deep learning profile BP001122.1

This page shows detailed deep learning-derived predictions and motifs for USF1 in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF1
Model ID: BP001122.1
Cell line/tissue: WTC11
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0093.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P22415  
Source: ENCSR248QBT
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.69e-03 -6.11e-04 3.49e-06 8.67e-02 -3.71e-08 3.84e-03 -2.44e-04 0.00e+00 9.50e-03 -1.96e-03 ]
C [ -1.59e-04 7.63e-04 1.27e-01 -3.41e-06 9.55e-02 2.56e-04 2.49e-04 1.15e-06 8.59e-04 1.80e-02 ]
G [ 3.27e-02 3.37e-04 7.62e-06 6.57e-05 3.74e-04 6.05e-02 -1.54e-04 1.29e-01 1.40e-03 6.10e-04 ]
T [ -5.68e-04 3.28e-02 0.00e+00 -6.72e-06 7.00e-05 -3.64e-05 7.48e-02 -6.07e-06 -2.08e-03 2.37e-03 ]

Frequency matrix

A [ 6578 2053 108 25525 40 5548 943 5 11260 2064 ]
C [ 4530 7722 27662 435 23914 2679 1131 31 5684 14315 ]
G [ 14793 5315 42 1256 1364 19353 708 27668 8462 4893 ]
T [ 1917 12728 6 602 2500 239 25036 114 2413 6546 ]

13 profiles found for the same TF (USF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001029.1 USF1 ENCSR000BGM HepG2 Homo sapiens
BP001031.1 USF1 ENCSR787CHF K562 Homo sapiens
BP001205.1 USF1 ENCSR000BKT K562 Homo sapiens
Showing 3 profiles of page 2 from 2 pages