Detailed information of deep learning profile BP001122.1

This page shows detailed deep learning-derived predictions and motifs for USF1 in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF1
Model ID: BP001122.1
Cell line/tissue: WTC11
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0093.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P22415  
Source: ENCSR248QBT
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.37e-03 -2.08e-03 -6.07e-06 7.48e-02 -3.64e-05 7.00e-05 -6.72e-06 0.00e+00 3.28e-02 -5.68e-04 ]
C [ 6.10e-04 1.40e-03 1.29e-01 -1.54e-04 6.05e-02 3.74e-04 6.57e-05 7.62e-06 3.37e-04 3.27e-02 ]
G [ 1.80e-02 8.59e-04 1.15e-06 2.49e-04 2.56e-04 9.55e-02 -3.41e-06 1.27e-01 7.63e-04 -1.59e-04 ]
T [ -1.96e-03 9.50e-03 0.00e+00 -2.44e-04 3.84e-03 -3.71e-08 8.67e-02 3.49e-06 -6.11e-04 3.69e-03 ]

Frequency matrix

A [ 6546 2413 114 25036 239 2500 602 6 12728 1917 ]
C [ 4893 8462 27668 708 19353 1364 1256 42 5315 14793 ]
G [ 14315 5684 31 1131 2679 23914 435 27662 7722 4530 ]
T [ 2064 11260 5 943 5548 40 25525 108 2053 6578 ]

13 profiles found for the same TF (USF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000253.1 USF1 ENCSR000BGI GM12878 Homo sapiens
BP000381.1 USF1 ENCSR000BTZ SK-N-SH Homo sapiens
BP000422.1 USF1 ENCSR099FCQ HepG2 Homo sapiens
BP000512.1 USF1 ENCSR000BPV A549 Homo sapiens
BP000514.1 USF1 ENCSR000BSX Ishikawa Homo sapiens
BP000844.1 USF1 ENCSR000BIU H1 Homo sapiens
BP000934.1 USF1 ENCSR000BMF SK-N-SH Homo sapiens
BP000968.1 USF1 ENCSR000BJB A549 Homo sapiens
BP000990.1 USF1 ENCSR000BVK HCT116 Homo sapiens
BP001010.1 USF1 ENCSR000BHX A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages