Detailed information of deep learning profile BP001124.1

This page shows detailed deep learning-derived predictions and motifs for ATF2 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ATF2
Model ID: BP001124.1
Cell line/tissue: GM12878
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
Best Match(es): MA1632.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P15336  
Source: ENCSR000BQK
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.14e-02 -2.95e-06 -3.96e-05 4.08e-02 -5.67e-06 7.18e-04 -1.43e-05 2.06e-03 3.05e-02 -3.08e-04 ]
C [ -5.86e-04 -4.01e-06 -2.89e-05 0.00e+00 2.87e-02 -2.39e-04 1.78e-05 2.52e-02 -9.35e-06 1.66e-03 ]
G [ 1.13e-03 0.00e+00 2.18e-02 2.60e-05 1.00e-04 7.29e-03 -8.29e-06 -5.03e-05 -8.88e-05 -4.77e-04 ]
T [ -2.68e-04 3.53e-02 3.23e-03 6.10e-06 2.27e-05 -8.68e-04 3.44e-02 -2.90e-05 -1.25e-04 9.83e-03 ]

Frequency matrix

A [ 7345 161 324 13071 238 5011 438 2147 12172 983 ]
C [ 1962 184 469 1 10453 3477 197 10480 146 3502 ]
G [ 2980 14 9505 62 1382 3322 202 331 316 2127 ]
T [ 886 12814 2875 39 1099 1364 12336 215 539 6560 ]

7 profiles found for the same TF (ATF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000308.1 ATF2 ENCSR047BUZ HepG2 Homo sapiens
BP000311.1 ATF2 ENCSR961PPA GM12878 Homo sapiens
BP000519.1 ATF2 ENCSR217HTK HEK293 Homo sapiens
BP000753.1 ATF2 ENCSR000BQU H1 Homo sapiens
BP000803.1 ATF2 ENCSR014ARU K562 Homo sapiens
BP001049.1 ATF2 ENCSR869IUD K562 Homo sapiens
BP001195.1 ATF2 ENCSR908HWZ HepG2 Homo sapiens
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