Detailed information of deep learning profile BP001124.1

This page shows detailed deep learning-derived predictions and motifs for ATF2 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ATF2
Model ID: BP001124.1
Cell line/tissue: GM12878
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
Best Match(es): MA1632.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P15336  
Source: ENCSR000BQK
Model: BPNet

Contribution weight matrix (CWM)

A [ 9.83e-03 -1.25e-04 -2.90e-05 3.44e-02 -8.68e-04 2.27e-05 6.10e-06 3.23e-03 3.53e-02 -2.68e-04 ]
C [ -4.77e-04 -8.88e-05 -5.03e-05 -8.29e-06 7.29e-03 1.00e-04 2.60e-05 2.18e-02 0.00e+00 1.13e-03 ]
G [ 1.66e-03 -9.35e-06 2.52e-02 1.78e-05 -2.39e-04 2.87e-02 0.00e+00 -2.89e-05 -4.01e-06 -5.86e-04 ]
T [ -3.08e-04 3.05e-02 2.06e-03 -1.43e-05 7.18e-04 -5.67e-06 4.08e-02 -3.96e-05 -2.95e-06 1.14e-02 ]

Frequency matrix

A [ 6560 539 215 12336 1364 1099 39 2875 12814 886 ]
C [ 2127 316 331 202 3322 1382 62 9505 14 2980 ]
G [ 3502 146 10480 197 3477 10453 1 469 184 1962 ]
T [ 983 12172 2147 438 5011 238 13071 324 161 7345 ]

7 profiles found for the same TF (ATF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000308.1 ATF2 ENCSR047BUZ HepG2 Homo sapiens
BP000311.1 ATF2 ENCSR961PPA GM12878 Homo sapiens
BP000519.1 ATF2 ENCSR217HTK HEK293 Homo sapiens
BP000753.1 ATF2 ENCSR000BQU H1 Homo sapiens
BP000803.1 ATF2 ENCSR014ARU K562 Homo sapiens
BP001049.1 ATF2 ENCSR869IUD K562 Homo sapiens
BP001195.1 ATF2 ENCSR908HWZ HepG2 Homo sapiens
Showing 7 profiles of page 1 from 1 pages
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