Detailed information of deep learning profile BP001125.1

This page shows detailed deep learning-derived predictions and motifs for CTCF in tibial artery using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CTCF
Model ID: BP001125.1
Cell line/tissue: tibial artery
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0139.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P49711  
Source: ENCSR699BEK
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.27e-03 -5.15e-04 2.92e-02 -1.70e-03 -4.94e-03 7.50e-02 -3.21e-04 1.76e-02 -2.72e-03 -5.20e-04 -1.08e-03 -2.48e-03 8.99e-03 -2.46e-03 ]
C [ 8.85e-02 1.74e-01 -7.89e-04 6.52e-02 1.61e-02 -1.33e-04 -3.07e-05 -1.60e-05 7.62e-05 3.81e-06 1.06e-04 8.15e-02 -3.26e-04 2.29e-02 ]
G [ -1.46e-03 -1.96e-04 5.32e-03 1.21e-02 -1.84e-03 6.10e-04 1.66e-01 6.31e-02 4.63e-02 1.51e-01 9.70e-02 -6.24e-04 4.62e-02 1.27e-02 ]
T [ -2.53e-03 -4.30e-04 -4.41e-03 -1.49e-03 1.73e-02 -1.88e-03 -2.34e-04 -3.60e-04 7.20e-03 -3.01e-04 1.18e-04 -2.20e-03 -2.35e-03 -6.74e-04 ]

Frequency matrix

A [ 2438 3 19633 1260 4456 23101 211 11275 1482 26 511 3727 11561 2895 ]
C [ 22375 27747 1036 16613 11303 955 60 330 1332 4 840 21074 1372 13259 ]
G [ 1438 3 3845 9133 2311 2169 27376 15870 14675 27716 24360 758 13506 9113 ]
T [ 1502 0 3240 746 9684 1528 106 278 10264 7 2042 2194 1313 2487 ]

Other motif patterns

438 profiles found for the same TF (CTCF) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000222.1 CTCF ENCSR130TQM A549 Homo sapiens
BP000224.1 CTCF ENCSR907BES transverse colon Homo sapiens
BP000225.1 CTCF ENCSR610UDC middle frontal area 46 Homo sapiens
BP000228.1 CTCF ENCSR000DTI cardiac muscle cell Homo sapiens
BP000229.1 CTCF ENCSR027HML OCI-LY7 Homo sapiens
BP000230.1 CTCF ENCSR092VKJ middle frontal area 46 Homo sapiens
BP000235.1 CTCF ENCSR000DYD A549 Homo sapiens
BP000236.1 CTCF ENCSR544APK heart left ventricle Homo sapiens
BP000238.1 CTCF ENCSR000DLB GM13977 Homo sapiens
BP000248.1 CTCF ENCSR336VBV A549 Homo sapiens
Showing 10 profiles of page 2 from 44 pages