Detailed information of deep learning profile BP001125.1

This page shows detailed deep learning-derived predictions and motifs for CTCF in tibial artery using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CTCF
Model ID: BP001125.1
Cell line/tissue: tibial artery
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0139.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P49711  
Source: ENCSR699BEK
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.27e-03 -5.15e-04 2.92e-02 -1.70e-03 -4.94e-03 7.50e-02 -3.21e-04 1.76e-02 -2.72e-03 -5.20e-04 -1.08e-03 -2.48e-03 8.99e-03 -2.46e-03 ]
C [ 8.85e-02 1.74e-01 -7.89e-04 6.52e-02 1.61e-02 -1.33e-04 -3.07e-05 -1.60e-05 7.62e-05 3.81e-06 1.06e-04 8.15e-02 -3.26e-04 2.29e-02 ]
G [ -1.46e-03 -1.96e-04 5.32e-03 1.21e-02 -1.84e-03 6.10e-04 1.66e-01 6.31e-02 4.63e-02 1.51e-01 9.70e-02 -6.24e-04 4.62e-02 1.27e-02 ]
T [ -2.53e-03 -4.30e-04 -4.41e-03 -1.49e-03 1.73e-02 -1.88e-03 -2.34e-04 -3.60e-04 7.20e-03 -3.01e-04 1.18e-04 -2.20e-03 -2.35e-03 -6.74e-04 ]

Frequency matrix

A [ 2438 3 19633 1260 4456 23101 211 11275 1482 26 511 3727 11561 2895 ]
C [ 22375 27747 1036 16613 11303 955 60 330 1332 4 840 21074 1372 13259 ]
G [ 1438 3 3845 9133 2311 2169 27376 15870 14675 27716 24360 758 13506 9113 ]
T [ 1502 0 3240 746 9684 1528 106 278 10264 7 2042 2194 1313 2487 ]

Other motif patterns

438 profiles found for the same TF (CTCF) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000374.1 CTCF ENCSR553UWG A549 Homo sapiens
BP000375.1 CTCF ENCSR353DFU esophagus muscularis mucosa Homo sapiens
BP000376.1 CTCF ENCSR467EQP brain Homo sapiens
BP000377.1 CTCF ENCSR243INX PC-9 Homo sapiens
BP000385.1 CTCF ENCSR559KAB esophagus muscularis mucosa Homo sapiens
BP000386.1 CTCF ENCSR000DTR epithelial cell of esophagus Homo sapiens
BP000388.1 CTCF ENCSR000DXD epithelial cell of proximal tubule Homo sapiens
BP000390.1 CTCF ENCSR203QEB Panc1 Homo sapiens
BP000392.1 CTCF ENCSR218MVT neural crest cell Homo sapiens
BP000395.1 CTCF ENCSR000APM fibroblast of dermis Homo sapiens
Showing 10 profiles of page 8 from 44 pages