This page shows detailed deep learning-derived predictions and motifs for CTCF in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001126.1 |
| Cell line/tissue: | HeLa-S3 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DUB |
| Model: | BPNet |
| A [ | -1.39e-03 | -4.16e-03 | -3.51e-03 | -1.46e-03 | -1.05e-03 | 3.80e-03 | -8.86e-04 | -3.74e-04 | -2.95e-03 | 2.64e-02 | -2.52e-03 | -6.74e-03 | -9.47e-04 | -3.27e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.26e-02 | 6.17e-02 | 7.82e-04 | 1.20e-01 | 2.00e-01 | 7.10e-02 | 9.44e-02 | 2.22e-01 | 1.74e-03 | -2.53e-03 | 1.39e-02 | 5.52e-03 | -5.35e-04 | -1.99e-03 | ] |
| G [ | 3.46e-02 | 1.06e-03 | 9.70e-02 | 2.12e-03 | -7.27e-05 | -4.57e-04 | -2.39e-04 | -8.36e-05 | -3.92e-04 | 2.00e-02 | 7.35e-02 | 6.88e-04 | 2.16e-01 | 1.19e-01 | ] |
| T [ | -3.45e-03 | 8.03e-03 | -3.93e-03 | -2.38e-03 | -1.19e-03 | -6.09e-03 | 1.50e-02 | -4.55e-04 | 9.25e-02 | -6.11e-03 | -1.48e-03 | 3.14e-02 | -1.41e-03 | -2.51e-03 | ] |
| A [ | 6112 | 3460 | 5102 | 4463 | 910 | 16303 | 881 | 273 | 3495 | 19055 | 1635 | 8608 | 431 | 3110 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 15381 | 25272 | 3021 | 42057 | 50243 | 30265 | 33220 | 51907 | 4954 | 4481 | 18285 | 7001 | 411 | 3304 | ] |
| G [ | 25335 | 4521 | 35804 | 3836 | 615 | 1967 | 547 | 86 | 1449 | 21190 | 29241 | 3121 | 50442 | 41684 | ] |
| T [ | 5845 | 19420 | 8745 | 2317 | 904 | 4137 | 18024 | 406 | 42774 | 7946 | 3511 | 33943 | 1387 | 4574 | ] |