Detailed information of deep learning profile BP001127.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP001127.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR660RYY
Model: BPNet

Contribution weight matrix (CWM)

A [ -6.83e-04 4.17e-03 4.30e-02 -1.13e-05 1.65e-02 -7.54e-04 2.57e-03 3.79e-03 -3.69e-04 8.00e-06 -2.03e-04 2.10e-03 5.68e-06 -1.33e-03 ]
C [ -2.78e-04 -1.11e-03 -5.39e-04 6.51e-02 -1.40e-03 7.93e-04 -1.42e-03 7.19e-04 9.79e-04 0.00e+00 -5.60e-05 -1.52e-03 5.07e-02 3.54e-03 ]
G [ 3.61e-02 -1.03e-03 -4.09e-04 -1.06e-04 2.29e-03 1.92e-03 -1.14e-03 1.11e-03 -1.09e-04 7.51e-02 -1.35e-05 -1.04e-03 -6.13e-06 -2.16e-05 ]
T [ -5.13e-04 1.24e-03 -4.61e-04 8.63e-05 -2.17e-03 2.86e-03 2.87e-03 -6.50e-04 2.61e-02 6.59e-07 4.96e-02 4.98e-03 5.84e-06 5.92e-03 ]

Frequency matrix

A [ 1983 4040 8451 10 7096 2034 3319 3389 1577 10 400 2660 436 1952 ]
C [ 373 1807 560 10885 653 2655 2079 2984 549 2 157 2236 9914 3537 ]
G [ 6821 2395 741 27 743 3304 2220 2610 204 10969 52 1401 32 237 ]
T [ 1805 2740 1230 60 2490 2990 3364 1998 8652 1 10373 4685 600 5256 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000782.1 NR3C1 ENCSR857QEA A549 Homo sapiens
BP000789.1 NR3C1 ENCSR000BHE A549 Homo sapiens
BP000837.1 NR3C1 ENCSR287FWE A549 Homo sapiens
BP000919.1 NR3C1 ENCSR908AOO A549 Homo sapiens
BP000983.1 NR3C1 ENCSR000BJC Ishikawa Homo sapiens
BP001035.1 NR3C1 ENCSR773NQB A549 Homo sapiens
BP001151.1 NR3C1 ENCSR919OXR A549 Homo sapiens
BP001200.1 NR3C1 ENCSR458VTP A549 Homo sapiens
Showing 8 profiles of page 2 from 2 pages