Detailed information of deep learning profile BP001127.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP001127.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR660RYY
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.92e-03 5.84e-06 4.98e-03 4.96e-02 6.59e-07 2.61e-02 -6.50e-04 2.87e-03 2.86e-03 -2.17e-03 8.63e-05 -4.61e-04 1.24e-03 -5.13e-04 ]
C [ -2.16e-05 -6.13e-06 -1.04e-03 -1.35e-05 7.51e-02 -1.09e-04 1.11e-03 -1.14e-03 1.92e-03 2.29e-03 -1.06e-04 -4.09e-04 -1.03e-03 3.61e-02 ]
G [ 3.54e-03 5.07e-02 -1.52e-03 -5.60e-05 0.00e+00 9.79e-04 7.19e-04 -1.42e-03 7.93e-04 -1.40e-03 6.51e-02 -5.39e-04 -1.11e-03 -2.78e-04 ]
T [ -1.33e-03 5.68e-06 2.10e-03 -2.03e-04 8.00e-06 -3.69e-04 3.79e-03 2.57e-03 -7.54e-04 1.65e-02 -1.13e-05 4.30e-02 4.17e-03 -6.83e-04 ]

Frequency matrix

A [ 5256 600 4685 10373 1 8652 1998 3364 2990 2490 60 1230 2740 1805 ]
C [ 237 32 1401 52 10969 204 2610 2220 3304 743 27 741 2395 6821 ]
G [ 3537 9914 2236 157 2 549 2984 2079 2655 653 10885 560 1807 373 ]
T [ 1952 436 2660 400 10 1577 3389 3319 2034 7096 10 8451 4040 1983 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000215.1 NR3C1 ENCSR952GOL A549 Homo sapiens
BP000278.1 NR3C1 ENCSR471EKW A549 Homo sapiens
BP000289.1 NR3C1 ENCSR000BHG A549 Homo sapiens
BP000310.1 NR3C1 ENCSR255CTA A549 Homo sapiens
BP000332.1 NR3C1 ENCSR720DXT A549 Homo sapiens
BP000345.1 NR3C1 ENCSR385RUW A549 Homo sapiens
BP000513.1 NR3C1 ENCSR070VXO A549 Homo sapiens
BP000581.1 NR3C1 ENCSR691GRA A549 Homo sapiens
BP000659.1 NR3C1 ENCSR424JOE A549 Homo sapiens
BP000734.1 NR3C1 ENCSR686PFM A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages