This page shows detailed deep learning-derived predictions and motifs for CTCF in chondrocyte using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001128.1 |
| Cell line/tissue: | chondrocyte |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR190BZA |
| Model: | BPNet |
| A [ | -1.63e-03 | -1.70e-03 | 2.74e-02 | -1.84e-03 | -4.76e-03 | 7.57e-02 | -4.96e-04 | 1.30e-02 | -6.38e-03 | -1.30e-03 | -2.21e-03 | -2.41e-03 | 7.86e-03 | -2.85e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.61e-02 | 1.76e-01 | 1.94e-04 | 5.85e-02 | 1.87e-02 | -1.71e-04 | -6.30e-05 | -1.18e-04 | -3.37e-05 | -4.51e-05 | 1.78e-03 | 7.69e-02 | 8.09e-04 | 2.90e-02 | ] |
| G [ | -1.94e-03 | -4.64e-04 | 6.48e-03 | 1.51e-02 | -1.84e-03 | 2.21e-03 | 1.90e-01 | 9.04e-02 | 6.21e-02 | 1.65e-01 | 1.08e-01 | 2.08e-04 | 4.69e-02 | 1.03e-02 | ] |
| T [ | -2.86e-03 | -1.14e-03 | -6.20e-03 | -2.39e-03 | 2.06e-02 | -2.72e-03 | -4.81e-04 | -7.92e-04 | 4.05e-03 | -9.81e-04 | -6.32e-04 | -2.99e-03 | -3.13e-03 | -1.18e-05 | ] |
| A [ | 6633 | 351 | 42391 | 4082 | 10463 | 54073 | 7 | 21242 | 6497 | 804 | 2795 | 13946 | 22325 | 8355 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 49604 | 64540 | 2913 | 36245 | 25115 | 1780 | 3 | 376 | 2580 | 256 | 4423 | 39568 | 5641 | 30088 | ] |
| G [ | 4423 | 33 | 8519 | 22598 | 5474 | 4974 | 64975 | 42706 | 36144 | 63196 | 52109 | 4058 | 31941 | 17726 | ] |
| T [ | 4332 | 68 | 11169 | 2067 | 23941 | 4165 | 7 | 668 | 19770 | 736 | 5665 | 7421 | 5085 | 8823 | ] |
